Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3879 | 11860;11861;11862 | chr2:178741598;178741597;178741596 | chr2:179606325;179606324;179606323 |
N2AB | 3562 | 10909;10910;10911 | chr2:178741598;178741597;178741596 | chr2:179606325;179606324;179606323 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3516 | 10771;10772;10773 | chr2:178741598;178741597;178741596 | chr2:179606325;179606324;179606323 |
Novex-1 | 3641 | 11146;11147;11148 | chr2:178741598;178741597;178741596 | chr2:179606325;179606324;179606323 |
Novex-2 | 3708 | 11347;11348;11349 | chr2:178741598;178741597;178741596 | chr2:179606325;179606324;179606323 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs765448965 | -1.617 | 0.58 | D | 0.337 | 0.446 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
I/V | rs765448965 | -1.617 | 0.58 | D | 0.337 | 0.446 | None | gnomAD-4.0.0 | 3.42096E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.51991E-05 | None | 0 | 0 | 3.5978E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.954 | likely_pathogenic | 0.9358 | pathogenic | -2.963 | Highly Destabilizing | 0.953 | D | 0.705 | prob.neutral | None | None | None | None | N |
I/C | 0.9516 | likely_pathogenic | 0.9329 | pathogenic | -2.163 | Highly Destabilizing | 0.999 | D | 0.78 | deleterious | None | None | None | None | N |
I/D | 0.9954 | likely_pathogenic | 0.993 | pathogenic | -3.504 | Highly Destabilizing | 0.998 | D | 0.875 | deleterious | None | None | None | None | N |
I/E | 0.9915 | likely_pathogenic | 0.9872 | pathogenic | -3.211 | Highly Destabilizing | 0.998 | D | 0.872 | deleterious | None | None | None | None | N |
I/F | 0.4802 | ambiguous | 0.4056 | ambiguous | -1.765 | Destabilizing | 0.982 | D | 0.707 | prob.neutral | D | 0.605496333 | None | None | N |
I/G | 0.9917 | likely_pathogenic | 0.9866 | pathogenic | -3.569 | Highly Destabilizing | 0.993 | D | 0.875 | deleterious | None | None | None | None | N |
I/H | 0.9616 | likely_pathogenic | 0.9435 | pathogenic | -3.057 | Highly Destabilizing | 0.999 | D | 0.869 | deleterious | None | None | None | None | N |
I/K | 0.9615 | likely_pathogenic | 0.9434 | pathogenic | -2.425 | Highly Destabilizing | 0.993 | D | 0.873 | deleterious | None | None | None | None | N |
I/L | 0.2652 | likely_benign | 0.2308 | benign | -1.161 | Destabilizing | 0.02 | N | 0.287 | neutral | D | 0.546839213 | None | None | N |
I/M | 0.3549 | ambiguous | 0.3045 | benign | -1.142 | Destabilizing | 0.982 | D | 0.692 | prob.neutral | D | 0.705813246 | None | None | N |
I/N | 0.9295 | likely_pathogenic | 0.9079 | pathogenic | -2.996 | Highly Destabilizing | 0.997 | D | 0.883 | deleterious | D | 0.796971146 | None | None | N |
I/P | 0.9935 | likely_pathogenic | 0.9911 | pathogenic | -1.749 | Destabilizing | 0.998 | D | 0.88 | deleterious | None | None | None | None | N |
I/Q | 0.9752 | likely_pathogenic | 0.9639 | pathogenic | -2.735 | Highly Destabilizing | 0.998 | D | 0.894 | deleterious | None | None | None | None | N |
I/R | 0.9392 | likely_pathogenic | 0.9125 | pathogenic | -2.219 | Highly Destabilizing | 0.993 | D | 0.875 | deleterious | None | None | None | None | N |
I/S | 0.9242 | likely_pathogenic | 0.8979 | pathogenic | -3.66 | Highly Destabilizing | 0.991 | D | 0.835 | deleterious | D | 0.796971146 | None | None | N |
I/T | 0.9174 | likely_pathogenic | 0.894 | pathogenic | -3.209 | Highly Destabilizing | 0.991 | D | 0.761 | deleterious | D | 0.74085278 | None | None | N |
I/V | 0.1966 | likely_benign | 0.1781 | benign | -1.749 | Destabilizing | 0.58 | D | 0.337 | neutral | D | 0.547806922 | None | None | N |
I/W | 0.9826 | likely_pathogenic | 0.9725 | pathogenic | -2.206 | Highly Destabilizing | 0.999 | D | 0.859 | deleterious | None | None | None | None | N |
I/Y | 0.9049 | likely_pathogenic | 0.8745 | pathogenic | -1.963 | Destabilizing | 0.993 | D | 0.78 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.