Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3880 | 11863;11864;11865 | chr2:178741595;178741594;178741593 | chr2:179606322;179606321;179606320 |
N2AB | 3563 | 10912;10913;10914 | chr2:178741595;178741594;178741593 | chr2:179606322;179606321;179606320 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3517 | 10774;10775;10776 | chr2:178741595;178741594;178741593 | chr2:179606322;179606321;179606320 |
Novex-1 | 3642 | 11149;11150;11151 | chr2:178741595;178741594;178741593 | chr2:179606322;179606321;179606320 |
Novex-2 | 3709 | 11350;11351;11352 | chr2:178741595;178741594;178741593 | chr2:179606322;179606321;179606320 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs762132549 | -0.935 | 0.454 | N | 0.433 | 0.114 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 9.96E-05 | 0 | None | 0 | None | 0 | 0 | 0 |
L/V | rs762132549 | -0.935 | 0.454 | N | 0.433 | 0.114 | None | gnomAD-4.0.0 | 1.59118E-06 | None | None | None | None | N | None | 0 | 0 | None | 4.76644E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5496 | ambiguous | 0.4271 | ambiguous | -1.474 | Destabilizing | 0.525 | D | 0.433 | neutral | None | None | None | None | N |
L/C | 0.7163 | likely_pathogenic | 0.6259 | pathogenic | -0.986 | Destabilizing | 0.998 | D | 0.497 | neutral | None | None | None | None | N |
L/D | 0.9047 | likely_pathogenic | 0.8323 | pathogenic | -0.583 | Destabilizing | 0.842 | D | 0.623 | neutral | None | None | None | None | N |
L/E | 0.7486 | likely_pathogenic | 0.61 | pathogenic | -0.532 | Destabilizing | 0.842 | D | 0.616 | neutral | None | None | None | None | N |
L/F | 0.3214 | likely_benign | 0.2306 | benign | -0.797 | Destabilizing | 0.949 | D | 0.502 | neutral | None | None | None | None | N |
L/G | 0.787 | likely_pathogenic | 0.7025 | pathogenic | -1.838 | Destabilizing | 0.842 | D | 0.594 | neutral | None | None | None | None | N |
L/H | 0.4812 | ambiguous | 0.3414 | ambiguous | -0.923 | Destabilizing | 0.998 | D | 0.6 | neutral | None | None | None | None | N |
L/I | 0.1642 | likely_benign | 0.124 | benign | -0.539 | Destabilizing | 0.016 | N | 0.212 | neutral | None | None | None | None | N |
L/K | 0.6517 | likely_pathogenic | 0.4873 | ambiguous | -0.937 | Destabilizing | 0.842 | D | 0.589 | neutral | None | None | None | None | N |
L/M | 0.2483 | likely_benign | 0.1895 | benign | -0.545 | Destabilizing | 0.934 | D | 0.503 | neutral | N | 0.509788058 | None | None | N |
L/N | 0.5871 | likely_pathogenic | 0.529 | ambiguous | -0.867 | Destabilizing | 0.949 | D | 0.633 | neutral | None | None | None | None | N |
L/P | 0.3438 | ambiguous | 0.2737 | benign | -0.819 | Destabilizing | 0.005 | N | 0.351 | neutral | N | 0.491176686 | None | None | N |
L/Q | 0.4626 | ambiguous | 0.3116 | benign | -0.941 | Destabilizing | 0.966 | D | 0.607 | neutral | N | 0.484527528 | None | None | N |
L/R | 0.4346 | ambiguous | 0.2961 | benign | -0.453 | Destabilizing | 0.966 | D | 0.604 | neutral | N | 0.475839647 | None | None | N |
L/S | 0.5327 | ambiguous | 0.4029 | ambiguous | -1.576 | Destabilizing | 0.067 | N | 0.377 | neutral | None | None | None | None | N |
L/T | 0.4551 | ambiguous | 0.3361 | benign | -1.394 | Destabilizing | 0.029 | N | 0.164 | neutral | None | None | None | None | N |
L/V | 0.2028 | likely_benign | 0.1523 | benign | -0.819 | Destabilizing | 0.454 | N | 0.433 | neutral | N | 0.503467246 | None | None | N |
L/W | 0.5761 | likely_pathogenic | 0.4399 | ambiguous | -0.879 | Destabilizing | 0.998 | D | 0.609 | neutral | None | None | None | None | N |
L/Y | 0.6412 | likely_pathogenic | 0.5223 | ambiguous | -0.641 | Destabilizing | 0.991 | D | 0.54 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.