Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3942 | 12049;12050;12051 | chr2:178741409;178741408;178741407 | chr2:179606136;179606135;179606134 |
N2AB | 3625 | 11098;11099;11100 | chr2:178741409;178741408;178741407 | chr2:179606136;179606135;179606134 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3579 | 10960;10961;10962 | chr2:178741409;178741408;178741407 | chr2:179606136;179606135;179606134 |
Novex-1 | 3704 | 11335;11336;11337 | chr2:178741409;178741408;178741407 | chr2:179606136;179606135;179606134 |
Novex-2 | 3771 | 11536;11537;11538 | chr2:178741409;178741408;178741407 | chr2:179606136;179606135;179606134 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs2082461755 | None | 0.625 | N | 0.306 | 0.177 | None | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.8226E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3453 | ambiguous | 0.3667 | ambiguous | -0.346 | Destabilizing | 0.525 | D | 0.345 | neutral | None | None | None | None | I |
K/C | 0.69 | likely_pathogenic | 0.7046 | pathogenic | -0.456 | Destabilizing | 0.998 | D | 0.31 | neutral | None | None | None | None | I |
K/D | 0.559 | ambiguous | 0.5716 | pathogenic | 0.094 | Stabilizing | 0.842 | D | 0.399 | neutral | None | None | None | None | I |
K/E | 0.1309 | likely_benign | 0.1363 | benign | 0.198 | Stabilizing | 0.625 | D | 0.306 | neutral | N | 0.509764227 | None | None | I |
K/F | 0.7712 | likely_pathogenic | 0.7835 | pathogenic | 0.017 | Stabilizing | 0.974 | D | 0.353 | neutral | None | None | None | None | I |
K/G | 0.4047 | ambiguous | 0.4297 | ambiguous | -0.702 | Destabilizing | 0.842 | D | 0.379 | neutral | None | None | None | None | I |
K/H | 0.3347 | likely_benign | 0.34 | benign | -0.932 | Destabilizing | 0.037 | N | 0.179 | neutral | None | None | None | None | I |
K/I | 0.3981 | ambiguous | 0.4041 | ambiguous | 0.567 | Stabilizing | 0.728 | D | 0.39 | neutral | None | None | None | None | I |
K/L | 0.356 | ambiguous | 0.375 | ambiguous | 0.567 | Stabilizing | 0.525 | D | 0.342 | neutral | None | None | None | None | I |
K/M | 0.2504 | likely_benign | 0.257 | benign | 0.287 | Stabilizing | 0.966 | D | 0.357 | neutral | D | 0.584213283 | None | None | I |
K/N | 0.382 | ambiguous | 0.3996 | ambiguous | -0.282 | Destabilizing | 0.801 | D | 0.303 | neutral | N | 0.511636613 | None | None | I |
K/P | 0.7723 | likely_pathogenic | 0.7798 | pathogenic | 0.294 | Stabilizing | 0.974 | D | 0.382 | neutral | None | None | None | None | I |
K/Q | 0.1285 | likely_benign | 0.1329 | benign | -0.326 | Destabilizing | 0.801 | D | 0.349 | neutral | N | 0.500910637 | None | None | I |
K/R | 0.0839 | likely_benign | 0.0835 | benign | -0.474 | Destabilizing | 0.012 | N | 0.185 | neutral | N | 0.502849283 | None | None | I |
K/S | 0.3982 | ambiguous | 0.4131 | ambiguous | -0.913 | Destabilizing | 0.728 | D | 0.287 | neutral | None | None | None | None | I |
K/T | 0.1813 | likely_benign | 0.187 | benign | -0.606 | Destabilizing | 0.051 | N | 0.155 | neutral | N | 0.502918738 | None | None | I |
K/V | 0.3553 | ambiguous | 0.3681 | ambiguous | 0.294 | Stabilizing | 0.029 | N | 0.155 | neutral | None | None | None | None | I |
K/W | 0.7341 | likely_pathogenic | 0.7277 | pathogenic | 0.119 | Stabilizing | 0.998 | D | 0.341 | neutral | None | None | None | None | I |
K/Y | 0.625 | likely_pathogenic | 0.6247 | pathogenic | 0.394 | Stabilizing | 0.949 | D | 0.352 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.