Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3967 | 12124;12125;12126 | chr2:178741334;178741333;178741332 | chr2:179606061;179606060;179606059 |
N2AB | 3650 | 11173;11174;11175 | chr2:178741334;178741333;178741332 | chr2:179606061;179606060;179606059 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3604 | 11035;11036;11037 | chr2:178741334;178741333;178741332 | chr2:179606061;179606060;179606059 |
Novex-1 | 3729 | 11410;11411;11412 | chr2:178741334;178741333;178741332 | chr2:179606061;179606060;179606059 |
Novex-2 | 3796 | 11611;11612;11613 | chr2:178741334;178741333;178741332 | chr2:179606061;179606060;179606059 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.117 | D | 0.481 | 0.56 | None | gnomAD-4.0.0 | 1.59105E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.3789 | ambiguous | 0.3602 | ambiguous | -1.568 | Destabilizing | 0.117 | N | 0.481 | neutral | D | 0.667380815 | None | None | I |
P/C | 0.9301 | likely_pathogenic | 0.9183 | pathogenic | -0.913 | Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | I |
P/D | 0.9942 | likely_pathogenic | 0.9876 | pathogenic | -2.074 | Highly Destabilizing | 0.998 | D | 0.825 | deleterious | None | None | None | None | I |
P/E | 0.9757 | likely_pathogenic | 0.9515 | pathogenic | -2.108 | Highly Destabilizing | 0.995 | D | 0.807 | deleterious | None | None | None | None | I |
P/F | 0.9862 | likely_pathogenic | 0.9747 | pathogenic | -1.464 | Destabilizing | 0.999 | D | 0.832 | deleterious | None | None | None | None | I |
P/G | 0.9445 | likely_pathogenic | 0.9237 | pathogenic | -1.852 | Destabilizing | 0.966 | D | 0.737 | prob.delet. | None | None | None | None | I |
P/H | 0.968 | likely_pathogenic | 0.9371 | pathogenic | -1.572 | Destabilizing | 1.0 | D | 0.782 | deleterious | D | 0.818736665 | None | None | I |
P/I | 0.8538 | likely_pathogenic | 0.8329 | pathogenic | -0.88 | Destabilizing | 0.995 | D | 0.84 | deleterious | None | None | None | None | I |
P/K | 0.9863 | likely_pathogenic | 0.9717 | pathogenic | -1.294 | Destabilizing | 0.995 | D | 0.809 | deleterious | None | None | None | None | I |
P/L | 0.716 | likely_pathogenic | 0.6742 | pathogenic | -0.88 | Destabilizing | 0.987 | D | 0.805 | deleterious | D | 0.6904137 | None | None | I |
P/M | 0.9369 | likely_pathogenic | 0.9181 | pathogenic | -0.485 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | I |
P/N | 0.9871 | likely_pathogenic | 0.9768 | pathogenic | -1.055 | Destabilizing | 0.998 | D | 0.823 | deleterious | None | None | None | None | I |
P/Q | 0.9419 | likely_pathogenic | 0.8974 | pathogenic | -1.307 | Destabilizing | 0.998 | D | 0.83 | deleterious | None | None | None | None | I |
P/R | 0.9579 | likely_pathogenic | 0.9213 | pathogenic | -0.745 | Destabilizing | 0.997 | D | 0.827 | deleterious | D | 0.783709528 | None | None | I |
P/S | 0.8218 | likely_pathogenic | 0.7603 | pathogenic | -1.417 | Destabilizing | 0.987 | D | 0.769 | deleterious | D | 0.725365675 | None | None | I |
P/T | 0.769 | likely_pathogenic | 0.7064 | pathogenic | -1.362 | Destabilizing | 0.993 | D | 0.795 | deleterious | D | 0.782733684 | None | None | I |
P/V | 0.7198 | likely_pathogenic | 0.7019 | pathogenic | -1.077 | Destabilizing | 0.99 | D | 0.777 | deleterious | None | None | None | None | I |
P/W | 0.9969 | likely_pathogenic | 0.9924 | pathogenic | -1.696 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | I |
P/Y | 0.9905 | likely_pathogenic | 0.9803 | pathogenic | -1.411 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.