Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3981 | 12166;12167;12168 | chr2:178741292;178741291;178741290 | chr2:179606019;179606018;179606017 |
N2AB | 3664 | 11215;11216;11217 | chr2:178741292;178741291;178741290 | chr2:179606019;179606018;179606017 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3618 | 11077;11078;11079 | chr2:178741292;178741291;178741290 | chr2:179606019;179606018;179606017 |
Novex-1 | 3743 | 11452;11453;11454 | chr2:178741292;178741291;178741290 | chr2:179606019;179606018;179606017 |
Novex-2 | 3810 | 11653;11654;11655 | chr2:178741292;178741291;178741290 | chr2:179606019;179606018;179606017 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | rs761366397 | 0.017 | 0.027 | N | 0.373 | 0.102 | 0.0401082797425 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
S/T | rs761366397 | 0.017 | 0.027 | N | 0.373 | 0.102 | 0.0401082797425 | gnomAD-4.0.0 | 3.18219E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85789E-06 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2049 | likely_benign | 0.1666 | benign | -0.605 | Destabilizing | 0.035 | N | 0.374 | neutral | None | None | None | None | N |
S/C | 0.191 | likely_benign | 0.1645 | benign | -0.379 | Destabilizing | 0.915 | D | 0.303 | neutral | N | 0.520776159 | None | None | N |
S/D | 0.2884 | likely_benign | 0.216 | benign | 0.674 | Stabilizing | 0.001 | N | 0.154 | neutral | None | None | None | None | N |
S/E | 0.7106 | likely_pathogenic | 0.6068 | pathogenic | 0.641 | Stabilizing | 0.035 | N | 0.335 | neutral | None | None | None | None | N |
S/F | 0.6882 | likely_pathogenic | 0.5924 | pathogenic | -1.077 | Destabilizing | 0.791 | D | 0.347 | neutral | None | None | None | None | N |
S/G | 0.096 | likely_benign | 0.085 | benign | -0.775 | Destabilizing | None | N | 0.135 | neutral | N | 0.445407988 | None | None | N |
S/H | 0.4519 | ambiguous | 0.3721 | ambiguous | -1.107 | Destabilizing | 0.38 | N | 0.283 | neutral | None | None | None | None | N |
S/I | 0.518 | ambiguous | 0.4261 | ambiguous | -0.273 | Destabilizing | 0.484 | N | 0.359 | neutral | D | 0.601657669 | None | None | N |
S/K | 0.8073 | likely_pathogenic | 0.7221 | pathogenic | -0.237 | Destabilizing | 0.081 | N | 0.329 | neutral | None | None | None | None | N |
S/L | 0.3524 | ambiguous | 0.2954 | benign | -0.273 | Destabilizing | 0.149 | N | 0.376 | neutral | None | None | None | None | N |
S/M | 0.476 | ambiguous | 0.3977 | ambiguous | -0.207 | Destabilizing | 0.935 | D | 0.277 | neutral | None | None | None | None | N |
S/N | 0.0811 | likely_benign | 0.0751 | benign | -0.155 | Destabilizing | None | N | 0.122 | neutral | N | 0.452847835 | None | None | N |
S/P | 0.7976 | likely_pathogenic | 0.7345 | pathogenic | -0.353 | Destabilizing | 0.555 | D | 0.323 | neutral | None | None | None | None | N |
S/Q | 0.7304 | likely_pathogenic | 0.6403 | pathogenic | -0.246 | Destabilizing | 0.38 | N | 0.339 | neutral | None | None | None | None | N |
S/R | 0.7342 | likely_pathogenic | 0.6401 | pathogenic | -0.164 | Destabilizing | 0.317 | N | 0.349 | neutral | D | 0.523610775 | None | None | N |
S/T | 0.124 | likely_benign | 0.1103 | benign | -0.28 | Destabilizing | 0.027 | N | 0.373 | neutral | N | 0.456526959 | None | None | N |
S/V | 0.5337 | ambiguous | 0.4413 | ambiguous | -0.353 | Destabilizing | 0.262 | N | 0.392 | neutral | None | None | None | None | N |
S/W | 0.762 | likely_pathogenic | 0.6879 | pathogenic | -1.065 | Destabilizing | 0.935 | D | 0.497 | neutral | None | None | None | None | N |
S/Y | 0.4898 | ambiguous | 0.4177 | ambiguous | -0.767 | Destabilizing | 0.791 | D | 0.343 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.