Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3985 | 12178;12179;12180 | chr2:178741280;178741279;178741278 | chr2:179606007;179606006;179606005 |
N2AB | 3668 | 11227;11228;11229 | chr2:178741280;178741279;178741278 | chr2:179606007;179606006;179606005 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3622 | 11089;11090;11091 | chr2:178741280;178741279;178741278 | chr2:179606007;179606006;179606005 |
Novex-1 | 3747 | 11464;11465;11466 | chr2:178741280;178741279;178741278 | chr2:179606007;179606006;179606005 |
Novex-2 | 3814 | 11665;11666;11667 | chr2:178741280;178741279;178741278 | chr2:179606007;179606006;179606005 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.051 | N | 0.267 | 0.155 | None | gnomAD-4.0.0 | 1.59118E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85786E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2383 | likely_benign | 0.2134 | benign | -1.298 | Destabilizing | 0.454 | N | 0.285 | neutral | N | 0.507216827 | None | None | I |
T/C | 0.7621 | likely_pathogenic | 0.7185 | pathogenic | -0.949 | Destabilizing | 0.998 | D | 0.391 | neutral | None | None | None | None | I |
T/D | 0.762 | likely_pathogenic | 0.7184 | pathogenic | -0.658 | Destabilizing | 0.842 | D | 0.392 | neutral | None | None | None | None | I |
T/E | 0.6659 | likely_pathogenic | 0.642 | pathogenic | -0.553 | Destabilizing | 0.842 | D | 0.395 | neutral | None | None | None | None | I |
T/F | 0.8036 | likely_pathogenic | 0.7669 | pathogenic | -1.273 | Destabilizing | 0.016 | N | 0.332 | neutral | None | None | None | None | I |
T/G | 0.6711 | likely_pathogenic | 0.6174 | pathogenic | -1.613 | Destabilizing | 0.728 | D | 0.435 | neutral | None | None | None | None | I |
T/H | 0.5219 | ambiguous | 0.5114 | ambiguous | -1.755 | Destabilizing | 0.998 | D | 0.433 | neutral | None | None | None | None | I |
T/I | 0.6483 | likely_pathogenic | 0.599 | pathogenic | -0.509 | Destabilizing | 0.051 | N | 0.267 | neutral | N | 0.500052215 | None | None | I |
T/K | 0.4844 | ambiguous | 0.492 | ambiguous | -0.51 | Destabilizing | 0.842 | D | 0.394 | neutral | None | None | None | None | I |
T/L | 0.4407 | ambiguous | 0.3968 | ambiguous | -0.509 | Destabilizing | 0.525 | D | 0.383 | neutral | None | None | None | None | I |
T/M | 0.2538 | likely_benign | 0.2355 | benign | -0.349 | Destabilizing | 0.974 | D | 0.403 | neutral | None | None | None | None | I |
T/N | 0.3391 | likely_benign | 0.317 | benign | -0.788 | Destabilizing | 0.801 | D | 0.345 | neutral | N | 0.506043095 | None | None | I |
T/P | 0.8511 | likely_pathogenic | 0.7665 | pathogenic | -0.743 | Destabilizing | 0.966 | D | 0.411 | neutral | D | 0.566969828 | None | None | I |
T/Q | 0.4726 | ambiguous | 0.4752 | ambiguous | -0.839 | Destabilizing | 0.974 | D | 0.409 | neutral | None | None | None | None | I |
T/R | 0.3661 | ambiguous | 0.3873 | ambiguous | -0.495 | Destabilizing | 0.949 | D | 0.408 | neutral | None | None | None | None | I |
T/S | 0.2436 | likely_benign | 0.2369 | benign | -1.169 | Destabilizing | 0.022 | N | 0.107 | neutral | N | 0.475814559 | None | None | I |
T/V | 0.4919 | ambiguous | 0.4461 | ambiguous | -0.743 | Destabilizing | 0.067 | N | 0.099 | neutral | None | None | None | None | I |
T/W | 0.9327 | likely_pathogenic | 0.9068 | pathogenic | -1.189 | Destabilizing | 0.998 | D | 0.45 | neutral | None | None | None | None | I |
T/Y | 0.74 | likely_pathogenic | 0.7031 | pathogenic | -0.898 | Destabilizing | 0.904 | D | 0.447 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.