Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3993 | 12202;12203;12204 | chr2:178741256;178741255;178741254 | chr2:179605983;179605982;179605981 |
N2AB | 3676 | 11251;11252;11253 | chr2:178741256;178741255;178741254 | chr2:179605983;179605982;179605981 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3630 | 11113;11114;11115 | chr2:178741256;178741255;178741254 | chr2:179605983;179605982;179605981 |
Novex-1 | 3755 | 11488;11489;11490 | chr2:178741256;178741255;178741254 | chr2:179605983;179605982;179605981 |
Novex-2 | 3822 | 11689;11690;11691 | chr2:178741256;178741255;178741254 | chr2:179605983;179605982;179605981 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | rs771077873 | 0.335 | 0.896 | D | 0.525 | 0.253 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
S/P | rs771077873 | 0.335 | 0.896 | D | 0.525 | 0.253 | None | gnomAD-4.0.0 | 3.18292E-06 | None | None | None | None | I | None | 0 | 2.28655E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02425E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0883 | likely_benign | 0.0885 | benign | -0.543 | Destabilizing | 0.004 | N | 0.157 | neutral | N | 0.499148553 | None | None | I |
S/C | 0.1102 | likely_benign | 0.1109 | benign | -0.535 | Destabilizing | 0.97 | D | 0.501 | neutral | D | 0.557523696 | None | None | I |
S/D | 0.2918 | likely_benign | 0.2802 | benign | -1.204 | Destabilizing | 0.447 | N | 0.413 | neutral | None | None | None | None | I |
S/E | 0.3557 | ambiguous | 0.3544 | ambiguous | -1.193 | Destabilizing | 0.005 | N | 0.277 | neutral | None | None | None | None | I |
S/F | 0.1548 | likely_benign | 0.1462 | benign | -0.853 | Destabilizing | 0.81 | D | 0.604 | neutral | D | 0.567472252 | None | None | I |
S/G | 0.1279 | likely_benign | 0.1213 | benign | -0.786 | Destabilizing | 0.447 | N | 0.413 | neutral | None | None | None | None | I |
S/H | 0.2983 | likely_benign | 0.2918 | benign | -1.389 | Destabilizing | 0.977 | D | 0.505 | neutral | None | None | None | None | I |
S/I | 0.1666 | likely_benign | 0.1596 | benign | -0.004 | Destabilizing | 0.447 | N | 0.587 | neutral | None | None | None | None | I |
S/K | 0.5142 | ambiguous | 0.4997 | ambiguous | -0.737 | Destabilizing | 0.447 | N | 0.413 | neutral | None | None | None | None | I |
S/L | 0.1021 | likely_benign | 0.1008 | benign | -0.004 | Destabilizing | 0.005 | N | 0.417 | neutral | None | None | None | None | I |
S/M | 0.223 | likely_benign | 0.2166 | benign | 0.392 | Stabilizing | 0.85 | D | 0.517 | neutral | None | None | None | None | I |
S/N | 0.141 | likely_benign | 0.1408 | benign | -0.923 | Destabilizing | 0.617 | D | 0.469 | neutral | None | None | None | None | I |
S/P | 0.7145 | likely_pathogenic | 0.6812 | pathogenic | -0.15 | Destabilizing | 0.896 | D | 0.525 | neutral | D | 0.54944927 | None | None | I |
S/Q | 0.4309 | ambiguous | 0.4314 | ambiguous | -1.13 | Destabilizing | 0.739 | D | 0.475 | neutral | None | None | None | None | I |
S/R | 0.3952 | ambiguous | 0.3908 | ambiguous | -0.59 | Destabilizing | 0.85 | D | 0.526 | neutral | None | None | None | None | I |
S/T | 0.0907 | likely_benign | 0.0886 | benign | -0.767 | Destabilizing | 0.004 | N | 0.279 | neutral | N | 0.490463026 | None | None | I |
S/V | 0.2038 | likely_benign | 0.1911 | benign | -0.15 | Destabilizing | 0.447 | N | 0.559 | neutral | None | None | None | None | I |
S/W | 0.2805 | likely_benign | 0.2585 | benign | -0.933 | Destabilizing | 0.992 | D | 0.659 | neutral | None | None | None | None | I |
S/Y | 0.1532 | likely_benign | 0.144 | benign | -0.596 | Destabilizing | 0.896 | D | 0.598 | neutral | N | 0.512309973 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.