Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3995 | 12208;12209;12210 | chr2:178741250;178741249;178741248 | chr2:179605977;179605976;179605975 |
N2AB | 3678 | 11257;11258;11259 | chr2:178741250;178741249;178741248 | chr2:179605977;179605976;179605975 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3632 | 11119;11120;11121 | chr2:178741250;178741249;178741248 | chr2:179605977;179605976;179605975 |
Novex-1 | 3757 | 11494;11495;11496 | chr2:178741250;178741249;178741248 | chr2:179605977;179605976;179605975 |
Novex-2 | 3824 | 11695;11696;11697 | chr2:178741250;178741249;178741248 | chr2:179605977;179605976;179605975 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.011 | D | 0.393 | 0.189 | None | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
T/I | rs749320093 | 0.069 | 0.002 | D | 0.405 | 0.141 | None | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 6.48E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
T/I | rs749320093 | 0.069 | 0.002 | D | 0.405 | 0.141 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/I | rs749320093 | 0.069 | 0.002 | D | 0.405 | 0.141 | None | gnomAD-4.0.0 | 6.81721E-06 | None | None | None | None | N | None | 2.6698E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 7.6282E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.107 | likely_benign | 0.1038 | benign | -1.233 | Destabilizing | 0.011 | N | 0.393 | neutral | D | 0.547977668 | None | None | N |
T/C | 0.4298 | ambiguous | 0.4172 | ambiguous | -0.83 | Destabilizing | 0.001 | N | 0.522 | neutral | None | None | None | None | N |
T/D | 0.5203 | ambiguous | 0.5009 | ambiguous | -1.285 | Destabilizing | 0.033 | N | 0.594 | neutral | None | None | None | None | N |
T/E | 0.381 | ambiguous | 0.384 | ambiguous | -1.075 | Destabilizing | 0.033 | N | 0.582 | neutral | None | None | None | None | N |
T/F | 0.2791 | likely_benign | 0.2712 | benign | -0.812 | Destabilizing | 0.001 | N | 0.502 | neutral | None | None | None | None | N |
T/G | 0.4271 | ambiguous | 0.4091 | ambiguous | -1.651 | Destabilizing | 0.033 | N | 0.613 | neutral | None | None | None | None | N |
T/H | 0.2813 | likely_benign | 0.2878 | benign | -1.628 | Destabilizing | 0.54 | D | 0.636 | neutral | None | None | None | None | N |
T/I | 0.1658 | likely_benign | 0.169 | benign | -0.129 | Destabilizing | 0.002 | N | 0.405 | neutral | D | 0.5537281 | None | None | N |
T/K | 0.1738 | likely_benign | 0.2177 | benign | -0.461 | Destabilizing | None | N | 0.401 | neutral | None | None | None | None | N |
T/L | 0.1282 | likely_benign | 0.131 | benign | -0.129 | Destabilizing | None | N | 0.357 | neutral | None | None | None | None | N |
T/M | 0.1032 | likely_benign | 0.1054 | benign | -0.244 | Destabilizing | 0.367 | N | 0.651 | neutral | None | None | None | None | N |
T/N | 0.1768 | likely_benign | 0.1664 | benign | -1.115 | Destabilizing | None | N | 0.225 | neutral | D | 0.545527773 | None | None | N |
T/P | 0.6472 | likely_pathogenic | 0.6414 | pathogenic | -0.466 | Destabilizing | None | N | 0.405 | neutral | D | 0.736981276 | None | None | N |
T/Q | 0.2367 | likely_benign | 0.2658 | benign | -0.887 | Destabilizing | 0.076 | N | 0.653 | neutral | None | None | None | None | N |
T/R | 0.1384 | likely_benign | 0.1654 | benign | -0.667 | Destabilizing | 0.001 | N | 0.409 | neutral | None | None | None | None | N |
T/S | 0.1481 | likely_benign | 0.1396 | benign | -1.391 | Destabilizing | None | N | 0.214 | neutral | N | 0.511878888 | None | None | N |
T/V | 0.1689 | likely_benign | 0.1717 | benign | -0.466 | Destabilizing | 0.015 | N | 0.384 | neutral | None | None | None | None | N |
T/W | 0.6336 | likely_pathogenic | 0.6405 | pathogenic | -0.92 | Destabilizing | 0.931 | D | 0.643 | neutral | None | None | None | None | N |
T/Y | 0.2853 | likely_benign | 0.2811 | benign | -0.549 | Destabilizing | 0.076 | N | 0.659 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.