Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4025 | 12298;12299;12300 | chr2:178741160;178741159;178741158 | chr2:179605887;179605886;179605885 |
N2AB | 3708 | 11347;11348;11349 | chr2:178741160;178741159;178741158 | chr2:179605887;179605886;179605885 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3662 | 11209;11210;11211 | chr2:178741160;178741159;178741158 | chr2:179605887;179605886;179605885 |
Novex-1 | 3787 | 11584;11585;11586 | chr2:178741160;178741159;178741158 | chr2:179605887;179605886;179605885 |
Novex-2 | 3854 | 11785;11786;11787 | chr2:178741160;178741159;178741158 | chr2:179605887;179605886;179605885 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1452131866 | None | 0.505 | D | 0.705 | 0.487 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs1452131866 | None | 0.505 | D | 0.705 | 0.487 | None | gnomAD-4.0.0 | 2.56281E-06 | None | None | None | None | N | None | 1.6905E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.39277E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2417 | likely_benign | 0.2666 | benign | -0.679 | Destabilizing | 0.338 | N | 0.675 | prob.neutral | D | 0.539195522 | None | None | N |
E/C | 0.9184 | likely_pathogenic | 0.9209 | pathogenic | -0.343 | Destabilizing | 0.991 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/D | 0.2672 | likely_benign | 0.2949 | benign | -0.792 | Destabilizing | 0.003 | N | 0.298 | neutral | D | 0.547604308 | None | None | N |
E/F | 0.841 | likely_pathogenic | 0.8563 | pathogenic | 0.049 | Stabilizing | 0.967 | D | 0.749 | deleterious | None | None | None | None | N |
E/G | 0.2887 | likely_benign | 0.3049 | benign | -1.039 | Destabilizing | 0.505 | D | 0.705 | prob.neutral | D | 0.672571961 | None | None | N |
E/H | 0.5145 | ambiguous | 0.5533 | ambiguous | -0.056 | Destabilizing | 0.826 | D | 0.645 | neutral | None | None | None | None | N |
E/I | 0.5785 | likely_pathogenic | 0.5987 | pathogenic | 0.298 | Stabilizing | 0.906 | D | 0.759 | deleterious | None | None | None | None | N |
E/K | 0.1341 | likely_benign | 0.1356 | benign | -0.152 | Destabilizing | 0.013 | N | 0.365 | neutral | N | 0.503933732 | None | None | N |
E/L | 0.5854 | likely_pathogenic | 0.6034 | pathogenic | 0.298 | Stabilizing | 0.826 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/M | 0.6297 | likely_pathogenic | 0.6497 | pathogenic | 0.565 | Stabilizing | 0.973 | D | 0.743 | deleterious | None | None | None | None | N |
E/N | 0.3784 | ambiguous | 0.4127 | ambiguous | -0.82 | Destabilizing | 0.404 | N | 0.632 | neutral | None | None | None | None | N |
E/P | 0.6939 | likely_pathogenic | 0.742 | pathogenic | -0.006 | Destabilizing | 0.906 | D | 0.751 | deleterious | None | None | None | None | N |
E/Q | 0.151 | likely_benign | 0.1561 | benign | -0.667 | Destabilizing | 0.007 | N | 0.291 | neutral | N | 0.515970534 | None | None | N |
E/R | 0.25 | likely_benign | 0.2539 | benign | 0.15 | Stabilizing | 0.404 | N | 0.632 | neutral | None | None | None | None | N |
E/S | 0.278 | likely_benign | 0.302 | benign | -1.071 | Destabilizing | 0.404 | N | 0.618 | neutral | None | None | None | None | N |
E/T | 0.3245 | likely_benign | 0.3496 | ambiguous | -0.758 | Destabilizing | 0.826 | D | 0.72 | prob.delet. | None | None | None | None | N |
E/V | 0.3653 | ambiguous | 0.3771 | ambiguous | -0.006 | Destabilizing | 0.782 | D | 0.708 | prob.delet. | N | 0.507884418 | None | None | N |
E/W | 0.9335 | likely_pathogenic | 0.939 | pathogenic | 0.375 | Stabilizing | 0.991 | D | 0.698 | prob.neutral | None | None | None | None | N |
E/Y | 0.708 | likely_pathogenic | 0.7368 | pathogenic | 0.34 | Stabilizing | 0.906 | D | 0.761 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.