Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4608 | 14047;14048;14049 | chr2:178739411;178739410;178739409 | chr2:179604138;179604137;179604136 |
N2AB | 4291 | 13096;13097;13098 | chr2:178739411;178739410;178739409 | chr2:179604138;179604137;179604136 |
N2A | None | None | chr2:None | chr2:None |
N2B | 4245 | 12958;12959;12960 | chr2:178739411;178739410;178739409 | chr2:179604138;179604137;179604136 |
Novex-1 | 4370 | 13333;13334;13335 | chr2:178739411;178739410;178739409 | chr2:179604138;179604137;179604136 |
Novex-2 | 4437 | 13534;13535;13536 | chr2:178739411;178739410;178739409 | chr2:179604138;179604137;179604136 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.062 | D | 0.567 | 0.42 | None | gnomAD-4.0.0 | 1.59118E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85796E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4801 | ambiguous | 0.5753 | pathogenic | -1.852 | Destabilizing | 0.035 | N | 0.485 | neutral | None | None | None | None | N |
I/C | 0.7088 | likely_pathogenic | 0.7606 | pathogenic | -1.078 | Destabilizing | 0.824 | D | 0.631 | neutral | None | None | None | None | N |
I/D | 0.7916 | likely_pathogenic | 0.8516 | pathogenic | -1.763 | Destabilizing | 0.555 | D | 0.747 | deleterious | None | None | None | None | N |
I/E | 0.6818 | likely_pathogenic | 0.7662 | pathogenic | -1.764 | Destabilizing | 0.555 | D | 0.739 | prob.delet. | None | None | None | None | N |
I/F | 0.176 | likely_benign | 0.2192 | benign | -1.46 | Destabilizing | 0.001 | N | 0.357 | neutral | None | None | None | None | N |
I/G | 0.7193 | likely_pathogenic | 0.8041 | pathogenic | -2.176 | Highly Destabilizing | 0.149 | N | 0.73 | prob.delet. | None | None | None | None | N |
I/H | 0.6612 | likely_pathogenic | 0.7289 | pathogenic | -1.467 | Destabilizing | 0.935 | D | 0.772 | deleterious | None | None | None | None | N |
I/K | 0.5355 | ambiguous | 0.6308 | pathogenic | -1.176 | Destabilizing | 0.317 | N | 0.739 | prob.delet. | D | 0.621350577 | None | None | N |
I/L | 0.1302 | likely_benign | 0.1585 | benign | -1.02 | Destabilizing | 0.004 | N | 0.362 | neutral | N | 0.516911393 | None | None | N |
I/M | 0.1426 | likely_benign | 0.1625 | benign | -0.706 | Destabilizing | 0.004 | N | 0.409 | neutral | D | 0.577436831 | None | None | N |
I/N | 0.3759 | ambiguous | 0.4317 | ambiguous | -1.006 | Destabilizing | 0.555 | D | 0.765 | deleterious | None | None | None | None | N |
I/P | 0.6166 | likely_pathogenic | 0.6893 | pathogenic | -1.269 | Destabilizing | 0.791 | D | 0.759 | deleterious | None | None | None | None | N |
I/Q | 0.603 | likely_pathogenic | 0.6834 | pathogenic | -1.242 | Destabilizing | 0.38 | N | 0.773 | deleterious | None | None | None | None | N |
I/R | 0.4638 | ambiguous | 0.5447 | ambiguous | -0.574 | Destabilizing | 0.317 | N | 0.766 | deleterious | D | 0.660708173 | None | None | N |
I/S | 0.4131 | ambiguous | 0.499 | ambiguous | -1.573 | Destabilizing | 0.149 | N | 0.675 | prob.neutral | None | None | None | None | N |
I/T | 0.4102 | ambiguous | 0.4801 | ambiguous | -1.467 | Destabilizing | 0.062 | N | 0.567 | neutral | D | 0.620034815 | None | None | N |
I/V | 0.1005 | likely_benign | 0.1057 | benign | -1.269 | Destabilizing | None | N | 0.175 | neutral | N | 0.502653722 | None | None | N |
I/W | 0.8323 | likely_pathogenic | 0.8543 | pathogenic | -1.57 | Destabilizing | 0.935 | D | 0.771 | deleterious | None | None | None | None | N |
I/Y | 0.5003 | ambiguous | 0.5874 | pathogenic | -1.33 | Destabilizing | 0.235 | N | 0.609 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.