Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4618 | 14077;14078;14079 | chr2:178739381;178739380;178739379 | chr2:179604108;179604107;179604106 |
N2AB | 4301 | 13126;13127;13128 | chr2:178739381;178739380;178739379 | chr2:179604108;179604107;179604106 |
N2A | None | None | chr2:None | chr2:None |
N2B | 4255 | 12988;12989;12990 | chr2:178739381;178739380;178739379 | chr2:179604108;179604107;179604106 |
Novex-1 | 4380 | 13363;13364;13365 | chr2:178739381;178739380;178739379 | chr2:179604108;179604107;179604106 |
Novex-2 | 4447 | 13564;13565;13566 | chr2:178739381;178739380;178739379 | chr2:179604108;179604107;179604106 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs774836172 | -0.657 | 0.722 | D | 0.625 | 0.378 | 0.357313475932 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
E/G | rs774836172 | -0.657 | 0.722 | D | 0.625 | 0.378 | 0.357313475932 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
E/G | rs774836172 | -0.657 | 0.722 | D | 0.625 | 0.378 | 0.357313475932 | gnomAD-4.0.0 | 1.67309E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.11894E-05 | 0 | 3.20195E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1544 | likely_benign | 0.1559 | benign | -0.372 | Destabilizing | 0.565 | D | 0.58 | neutral | N | 0.504632284 | None | None | N |
E/C | 0.7921 | likely_pathogenic | 0.8096 | pathogenic | -0.02 | Destabilizing | 0.996 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/D | 0.1895 | likely_benign | 0.206 | benign | -0.355 | Destabilizing | 0.008 | N | 0.297 | neutral | N | 0.512652949 | None | None | N |
E/F | 0.668 | likely_pathogenic | 0.6795 | pathogenic | -0.27 | Destabilizing | 0.987 | D | 0.656 | neutral | None | None | None | None | N |
E/G | 0.1527 | likely_benign | 0.1672 | benign | -0.554 | Destabilizing | 0.722 | D | 0.625 | neutral | D | 0.600480297 | None | None | N |
E/H | 0.4298 | ambiguous | 0.4734 | ambiguous | 0.014 | Stabilizing | 0.989 | D | 0.503 | neutral | None | None | None | None | N |
E/I | 0.338 | likely_benign | 0.3432 | ambiguous | 0.07 | Stabilizing | 0.961 | D | 0.661 | neutral | None | None | None | None | N |
E/K | 0.0836 | likely_benign | 0.1013 | benign | 0.421 | Stabilizing | 0.008 | N | 0.318 | neutral | N | 0.507936956 | None | None | N |
E/L | 0.32 | likely_benign | 0.3441 | ambiguous | 0.07 | Stabilizing | 0.923 | D | 0.631 | neutral | None | None | None | None | N |
E/M | 0.3685 | ambiguous | 0.3894 | ambiguous | 0.158 | Stabilizing | 0.996 | D | 0.663 | neutral | None | None | None | None | N |
E/N | 0.2679 | likely_benign | 0.3032 | benign | 0.033 | Stabilizing | 0.923 | D | 0.491 | neutral | None | None | None | None | N |
E/P | 0.4972 | ambiguous | 0.5242 | ambiguous | -0.058 | Destabilizing | 0.024 | N | 0.369 | neutral | None | None | None | None | N |
E/Q | 0.1318 | likely_benign | 0.1416 | benign | 0.068 | Stabilizing | 0.565 | D | 0.497 | neutral | N | 0.501023868 | None | None | N |
E/R | 0.1518 | likely_benign | 0.1769 | benign | 0.597 | Stabilizing | 0.858 | D | 0.487 | neutral | None | None | None | None | N |
E/S | 0.2088 | likely_benign | 0.2213 | benign | -0.092 | Destabilizing | 0.633 | D | 0.512 | neutral | None | None | None | None | N |
E/T | 0.2218 | likely_benign | 0.2366 | benign | 0.063 | Stabilizing | 0.775 | D | 0.564 | neutral | None | None | None | None | N |
E/V | 0.1942 | likely_benign | 0.1952 | benign | -0.058 | Destabilizing | 0.901 | D | 0.604 | neutral | N | 0.512609915 | None | None | N |
E/W | 0.8431 | likely_pathogenic | 0.8686 | pathogenic | -0.12 | Destabilizing | 0.996 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/Y | 0.5756 | likely_pathogenic | 0.6059 | pathogenic | -0.024 | Destabilizing | 0.987 | D | 0.646 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.