Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4634 | 14125;14126;14127 | chr2:178739333;178739332;178739331 | chr2:179604060;179604059;179604058 |
N2AB | 4317 | 13174;13175;13176 | chr2:178739333;178739332;178739331 | chr2:179604060;179604059;179604058 |
N2A | None | None | chr2:None | chr2:None |
N2B | 4271 | 13036;13037;13038 | chr2:178739333;178739332;178739331 | chr2:179604060;179604059;179604058 |
Novex-1 | 4396 | 13411;13412;13413 | chr2:178739333;178739332;178739331 | chr2:179604060;179604059;179604058 |
Novex-2 | 4463 | 13612;13613;13614 | chr2:178739333;178739332;178739331 | chr2:179604060;179604059;179604058 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1408608016 | -0.516 | 0.117 | N | 0.42 | 0.056 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
E/D | rs1408608016 | -0.516 | 0.117 | N | 0.42 | 0.056 | None | gnomAD-4.0.0 | 4.10548E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39686E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1293 | likely_benign | 0.1338 | benign | -0.492 | Destabilizing | 0.027 | N | 0.449 | neutral | N | 0.510704917 | None | None | N |
E/C | 0.7706 | likely_pathogenic | 0.7868 | pathogenic | -0.24 | Destabilizing | 0.824 | D | 0.543 | neutral | None | None | None | None | N |
E/D | 0.1547 | likely_benign | 0.1724 | benign | -0.463 | Destabilizing | 0.117 | N | 0.42 | neutral | N | 0.514528051 | None | None | N |
E/F | 0.6058 | likely_pathogenic | 0.657 | pathogenic | -0.21 | Destabilizing | 0.38 | N | 0.584 | neutral | None | None | None | None | N |
E/G | 0.1742 | likely_benign | 0.1894 | benign | -0.727 | Destabilizing | 0.117 | N | 0.549 | neutral | D | 0.613103284 | None | None | N |
E/H | 0.3345 | likely_benign | 0.3776 | ambiguous | 0.023 | Stabilizing | 0.555 | D | 0.507 | neutral | None | None | None | None | N |
E/I | 0.2297 | likely_benign | 0.2382 | benign | 0.109 | Stabilizing | 0.001 | N | 0.386 | neutral | None | None | None | None | N |
E/K | 0.1001 | likely_benign | 0.1015 | benign | 0.061 | Stabilizing | 0.001 | N | 0.115 | neutral | N | 0.49114849 | None | None | N |
E/L | 0.3101 | likely_benign | 0.3337 | benign | 0.109 | Stabilizing | 0.035 | N | 0.47 | neutral | None | None | None | None | N |
E/M | 0.3089 | likely_benign | 0.3311 | benign | 0.167 | Stabilizing | 0.38 | N | 0.565 | neutral | None | None | None | None | N |
E/N | 0.2067 | likely_benign | 0.24 | benign | -0.303 | Destabilizing | 0.149 | N | 0.472 | neutral | None | None | None | None | N |
E/P | 0.835 | likely_pathogenic | 0.8774 | pathogenic | -0.071 | Destabilizing | 0.555 | D | 0.593 | neutral | None | None | None | None | N |
E/Q | 0.1161 | likely_benign | 0.1245 | benign | -0.246 | Destabilizing | 0.005 | N | 0.229 | neutral | N | 0.512905805 | None | None | N |
E/R | 0.1756 | likely_benign | 0.187 | benign | 0.387 | Stabilizing | 0.081 | N | 0.415 | neutral | None | None | None | None | N |
E/S | 0.177 | likely_benign | 0.1984 | benign | -0.496 | Destabilizing | 0.149 | N | 0.428 | neutral | None | None | None | None | N |
E/T | 0.1486 | likely_benign | 0.1611 | benign | -0.306 | Destabilizing | 0.081 | N | 0.511 | neutral | None | None | None | None | N |
E/V | 0.1386 | likely_benign | 0.1393 | benign | -0.071 | Destabilizing | None | N | 0.319 | neutral | D | 0.539019985 | None | None | N |
E/W | 0.7951 | likely_pathogenic | 0.8328 | pathogenic | -0.012 | Destabilizing | 0.935 | D | 0.571 | neutral | None | None | None | None | N |
E/Y | 0.4615 | ambiguous | 0.4989 | ambiguous | 0.037 | Stabilizing | 0.555 | D | 0.593 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.