Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4635 | 14128;14129;14130 | chr2:178739330;178739329;178739328 | chr2:179604057;179604056;179604055 |
N2AB | 4318 | 13177;13178;13179 | chr2:178739330;178739329;178739328 | chr2:179604057;179604056;179604055 |
N2A | None | None | chr2:None | chr2:None |
N2B | 4272 | 13039;13040;13041 | chr2:178739330;178739329;178739328 | chr2:179604057;179604056;179604055 |
Novex-1 | 4397 | 13414;13415;13416 | chr2:178739330;178739329;178739328 | chr2:179604057;179604056;179604055 |
Novex-2 | 4464 | 13615;13616;13617 | chr2:178739330;178739329;178739328 | chr2:179604057;179604056;179604055 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.977 | D | 0.579 | 0.685 | None | gnomAD-4.0.0 | 4.10548E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39683E-06 | 0 | 0 |
V/M | None | None | 0.993 | D | 0.76 | 0.594 | None | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5169 | ambiguous | 0.5305 | ambiguous | -1.767 | Destabilizing | 0.977 | D | 0.579 | neutral | D | 0.679847732 | None | None | N |
V/C | 0.8951 | likely_pathogenic | 0.9013 | pathogenic | -1.048 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
V/D | 0.9401 | likely_pathogenic | 0.9542 | pathogenic | -1.974 | Destabilizing | 0.999 | D | 0.869 | deleterious | None | None | None | None | N |
V/E | 0.8789 | likely_pathogenic | 0.9016 | pathogenic | -1.845 | Destabilizing | 0.999 | D | 0.857 | deleterious | D | 0.76505727 | None | None | N |
V/F | 0.5669 | likely_pathogenic | 0.5944 | pathogenic | -1.18 | Destabilizing | 0.995 | D | 0.811 | deleterious | None | None | None | None | N |
V/G | 0.5804 | likely_pathogenic | 0.6085 | pathogenic | -2.214 | Highly Destabilizing | 0.999 | D | 0.88 | deleterious | D | 0.76505727 | None | None | N |
V/H | 0.9672 | likely_pathogenic | 0.9738 | pathogenic | -1.895 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
V/I | 0.1192 | likely_benign | 0.1173 | benign | -0.568 | Destabilizing | 0.15 | N | 0.231 | neutral | None | None | None | None | N |
V/K | 0.8788 | likely_pathogenic | 0.9099 | pathogenic | -1.406 | Destabilizing | 0.998 | D | 0.861 | deleterious | None | None | None | None | N |
V/L | 0.6128 | likely_pathogenic | 0.6517 | pathogenic | -0.568 | Destabilizing | 0.898 | D | 0.593 | neutral | D | 0.655149321 | None | None | N |
V/M | 0.4244 | ambiguous | 0.469 | ambiguous | -0.398 | Destabilizing | 0.993 | D | 0.76 | deleterious | D | 0.76531041 | None | None | N |
V/N | 0.8575 | likely_pathogenic | 0.8868 | pathogenic | -1.414 | Destabilizing | 0.999 | D | 0.898 | deleterious | None | None | None | None | N |
V/P | 0.9497 | likely_pathogenic | 0.9538 | pathogenic | -0.937 | Destabilizing | 0.999 | D | 0.85 | deleterious | None | None | None | None | N |
V/Q | 0.907 | likely_pathogenic | 0.9265 | pathogenic | -1.406 | Destabilizing | 0.999 | D | 0.888 | deleterious | None | None | None | None | N |
V/R | 0.8583 | likely_pathogenic | 0.8913 | pathogenic | -1.102 | Destabilizing | 0.999 | D | 0.899 | deleterious | None | None | None | None | N |
V/S | 0.77 | likely_pathogenic | 0.7978 | pathogenic | -1.981 | Destabilizing | 0.998 | D | 0.866 | deleterious | None | None | None | None | N |
V/T | 0.6028 | likely_pathogenic | 0.6461 | pathogenic | -1.721 | Destabilizing | 0.983 | D | 0.685 | prob.neutral | None | None | None | None | N |
V/W | 0.9688 | likely_pathogenic | 0.9745 | pathogenic | -1.583 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
V/Y | 0.8884 | likely_pathogenic | 0.9069 | pathogenic | -1.208 | Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.