Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4640 | 14143;14144;14145 | chr2:178739315;178739314;178739313 | chr2:179604042;179604041;179604040 |
N2AB | 4323 | 13192;13193;13194 | chr2:178739315;178739314;178739313 | chr2:179604042;179604041;179604040 |
N2A | None | None | chr2:None | chr2:None |
N2B | 4277 | 13054;13055;13056 | chr2:178739315;178739314;178739313 | chr2:179604042;179604041;179604040 |
Novex-1 | 4402 | 13429;13430;13431 | chr2:178739315;178739314;178739313 | chr2:179604042;179604041;179604040 |
Novex-2 | 4469 | 13630;13631;13632 | chr2:178739315;178739314;178739313 | chr2:179604042;179604041;179604040 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1441462753 | -0.969 | None | N | 0.169 | 0.071 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
E/G | rs1441462753 | -0.969 | None | N | 0.169 | 0.071 | None | gnomAD-4.0.0 | 4.10582E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49766E-06 | 0 | 1.65684E-05 |
E/K | rs1156910102 | None | None | N | 0.134 | 0.065 | None | gnomAD-4.0.0 | 1.5917E-06 | None | None | None | None | N | None | 5.65291E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs1156910102 | -0.441 | 0.003 | N | 0.171 | 0.064 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/Q | rs1156910102 | -0.441 | 0.003 | N | 0.171 | 0.064 | None | gnomAD-4.0.0 | 1.5917E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43303E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1614 | likely_benign | 0.1658 | benign | -0.479 | Destabilizing | 0.019 | N | 0.284 | neutral | N | 0.466495205 | None | None | N |
E/C | 0.6463 | likely_pathogenic | 0.6601 | pathogenic | -0.267 | Destabilizing | 0.958 | D | 0.407 | neutral | None | None | None | None | N |
E/D | 0.1553 | likely_benign | 0.1617 | benign | -0.403 | Destabilizing | None | N | 0.164 | neutral | N | 0.430491162 | None | None | N |
E/F | 0.7179 | likely_pathogenic | 0.7338 | pathogenic | -0.119 | Destabilizing | 0.859 | D | 0.441 | neutral | None | None | None | None | N |
E/G | 0.0856 | likely_benign | 0.0848 | benign | -0.712 | Destabilizing | None | N | 0.169 | neutral | N | 0.442523146 | None | None | N |
E/H | 0.3225 | likely_benign | 0.329 | benign | 0.148 | Stabilizing | 0.667 | D | 0.252 | neutral | None | None | None | None | N |
E/I | 0.5138 | ambiguous | 0.5476 | ambiguous | 0.117 | Stabilizing | 0.667 | D | 0.479 | neutral | None | None | None | None | N |
E/K | 0.0942 | likely_benign | 0.0914 | benign | 0.177 | Stabilizing | None | N | 0.134 | neutral | N | 0.449879835 | None | None | N |
E/L | 0.3543 | ambiguous | 0.3807 | ambiguous | 0.117 | Stabilizing | 0.22 | N | 0.447 | neutral | None | None | None | None | N |
E/M | 0.4273 | ambiguous | 0.4457 | ambiguous | 0.131 | Stabilizing | 0.667 | D | 0.414 | neutral | None | None | None | None | N |
E/N | 0.2037 | likely_benign | 0.2091 | benign | -0.303 | Destabilizing | None | N | 0.13 | neutral | None | None | None | None | N |
E/P | 0.7634 | likely_pathogenic | 0.7998 | pathogenic | -0.061 | Destabilizing | 0.364 | N | 0.415 | neutral | None | None | None | None | N |
E/Q | 0.0924 | likely_benign | 0.0918 | benign | -0.225 | Destabilizing | 0.003 | N | 0.171 | neutral | N | 0.454264288 | None | None | N |
E/R | 0.1361 | likely_benign | 0.1341 | benign | 0.486 | Stabilizing | 0.124 | N | 0.187 | neutral | None | None | None | None | N |
E/S | 0.1807 | likely_benign | 0.188 | benign | -0.46 | Destabilizing | 0.002 | N | 0.143 | neutral | None | None | None | None | N |
E/T | 0.3141 | likely_benign | 0.3419 | ambiguous | -0.26 | Destabilizing | 0.055 | N | 0.349 | neutral | None | None | None | None | N |
E/V | 0.3494 | ambiguous | 0.3784 | ambiguous | -0.061 | Destabilizing | 0.175 | N | 0.469 | neutral | D | 0.549454913 | None | None | N |
E/W | 0.7858 | likely_pathogenic | 0.8122 | pathogenic | 0.11 | Stabilizing | 0.958 | D | 0.428 | neutral | None | None | None | None | N |
E/Y | 0.5344 | ambiguous | 0.5533 | ambiguous | 0.139 | Stabilizing | 0.859 | D | 0.434 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.