Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4641 | 14146;14147;14148 | chr2:178739312;178739311;178739310 | chr2:179604039;179604038;179604037 |
N2AB | 4324 | 13195;13196;13197 | chr2:178739312;178739311;178739310 | chr2:179604039;179604038;179604037 |
N2A | None | None | chr2:None | chr2:None |
N2B | 4278 | 13057;13058;13059 | chr2:178739312;178739311;178739310 | chr2:179604039;179604038;179604037 |
Novex-1 | 4403 | 13432;13433;13434 | chr2:178739312;178739311;178739310 | chr2:179604039;179604038;179604037 |
Novex-2 | 4470 | 13633;13634;13635 | chr2:178739312;178739311;178739310 | chr2:179604039;179604038;179604037 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | None | N | 0.077 | 0.11 | None | gnomAD-4.0.0 | 1.59181E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85891E-06 | 0 | 0 |
N/I | rs1297520971 | None | 0.033 | N | 0.458 | 0.118 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/I | rs1297520971 | None | 0.033 | N | 0.458 | 0.118 | None | gnomAD-4.0.0 | 6.57082E-06 | None | None | None | None | N | None | 2.41243E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/S | None | None | None | N | 0.066 | 0.113 | None | gnomAD-4.0.0 | 1.59184E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43299E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1624 | likely_benign | 0.1752 | benign | -0.103 | Destabilizing | 0.002 | N | 0.23 | neutral | None | None | None | None | N |
N/C | 0.1951 | likely_benign | 0.2115 | benign | 0.164 | Stabilizing | None | N | 0.225 | neutral | None | None | None | None | N |
N/D | 0.0853 | likely_benign | 0.0811 | benign | 0.329 | Stabilizing | None | N | 0.077 | neutral | N | 0.421438501 | None | None | N |
N/E | 0.1776 | likely_benign | 0.1792 | benign | 0.29 | Stabilizing | 0.004 | N | 0.171 | neutral | None | None | None | None | N |
N/F | 0.4799 | ambiguous | 0.5214 | ambiguous | -0.664 | Destabilizing | 0.085 | N | 0.461 | neutral | None | None | None | None | N |
N/G | 0.1022 | likely_benign | 0.1012 | benign | -0.225 | Destabilizing | None | N | 0.077 | neutral | None | None | None | None | N |
N/H | 0.1023 | likely_benign | 0.103 | benign | -0.191 | Destabilizing | 0.196 | N | 0.317 | neutral | N | 0.447104771 | None | None | N |
N/I | 0.2747 | likely_benign | 0.3255 | benign | 0.122 | Stabilizing | 0.033 | N | 0.458 | neutral | N | 0.442225615 | None | None | N |
N/K | 0.1277 | likely_benign | 0.1287 | benign | 0.202 | Stabilizing | None | N | 0.073 | neutral | N | 0.425575998 | None | None | N |
N/L | 0.2385 | likely_benign | 0.2802 | benign | 0.122 | Stabilizing | 0.009 | N | 0.283 | neutral | None | None | None | None | N |
N/M | 0.2614 | likely_benign | 0.3036 | benign | 0.075 | Stabilizing | 0.497 | N | 0.342 | neutral | None | None | None | None | N |
N/P | 0.6707 | likely_pathogenic | 0.7387 | pathogenic | 0.072 | Stabilizing | 0.018 | N | 0.323 | neutral | None | None | None | None | N |
N/Q | 0.1783 | likely_benign | 0.1824 | benign | -0.16 | Destabilizing | 0.009 | N | 0.27 | neutral | None | None | None | None | N |
N/R | 0.1651 | likely_benign | 0.171 | benign | 0.25 | Stabilizing | 0.009 | N | 0.241 | neutral | None | None | None | None | N |
N/S | 0.0685 | likely_benign | 0.0715 | benign | -0.017 | Destabilizing | None | N | 0.066 | neutral | N | 0.413391973 | None | None | N |
N/T | 0.114 | likely_benign | 0.1261 | benign | 0.075 | Stabilizing | 0.003 | N | 0.191 | neutral | N | 0.453344718 | None | None | N |
N/V | 0.2727 | likely_benign | 0.3103 | benign | 0.072 | Stabilizing | 0.009 | N | 0.281 | neutral | None | None | None | None | N |
N/W | 0.5631 | ambiguous | 0.6018 | pathogenic | -0.782 | Destabilizing | 0.788 | D | 0.325 | neutral | None | None | None | None | N |
N/Y | 0.1272 | likely_benign | 0.1355 | benign | -0.443 | Destabilizing | 0.065 | N | 0.44 | neutral | N | 0.441485873 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.