Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4651 | 14176;14177;14178 | chr2:178739282;178739281;178739280 | chr2:179604009;179604008;179604007 |
N2AB | 4334 | 13225;13226;13227 | chr2:178739282;178739281;178739280 | chr2:179604009;179604008;179604007 |
N2A | None | None | chr2:None | chr2:None |
N2B | 4288 | 13087;13088;13089 | chr2:178739282;178739281;178739280 | chr2:179604009;179604008;179604007 |
Novex-1 | 4413 | 13462;13463;13464 | chr2:178739282;178739281;178739280 | chr2:179604009;179604008;179604007 |
Novex-2 | 4480 | 13663;13664;13665 | chr2:178739282;178739281;178739280 | chr2:179604009;179604008;179604007 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1244637034 | 0.161 | 0.454 | N | 0.332 | 0.198 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/E | rs1244637034 | 0.161 | 0.454 | N | 0.332 | 0.198 | None | gnomAD-4.0.0 | 3.18786E-06 | None | None | None | None | N | None | 0 | 2.28843E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4339E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3444 | ambiguous | 0.4017 | ambiguous | -0.588 | Destabilizing | 0.688 | D | 0.311 | neutral | None | None | None | None | N |
K/C | 0.6373 | likely_pathogenic | 0.6767 | pathogenic | -0.697 | Destabilizing | 0.998 | D | 0.416 | neutral | None | None | None | None | N |
K/D | 0.5365 | ambiguous | 0.6095 | pathogenic | -0.586 | Destabilizing | 0.842 | D | 0.333 | neutral | None | None | None | None | N |
K/E | 0.1581 | likely_benign | 0.1859 | benign | -0.47 | Destabilizing | 0.454 | N | 0.332 | neutral | N | 0.512650861 | None | None | N |
K/F | 0.6624 | likely_pathogenic | 0.7197 | pathogenic | -0.347 | Destabilizing | 0.949 | D | 0.418 | neutral | None | None | None | None | N |
K/G | 0.4979 | ambiguous | 0.5942 | pathogenic | -0.97 | Destabilizing | 0.842 | D | 0.347 | neutral | None | None | None | None | N |
K/H | 0.2304 | likely_benign | 0.2445 | benign | -1.454 | Destabilizing | 0.974 | D | 0.371 | neutral | None | None | None | None | N |
K/I | 0.2598 | likely_benign | 0.291 | benign | 0.408 | Stabilizing | 0.904 | D | 0.381 | neutral | None | None | None | None | N |
K/L | 0.2816 | likely_benign | 0.3235 | benign | 0.408 | Stabilizing | 0.275 | N | 0.343 | neutral | None | None | None | None | N |
K/M | 0.2175 | likely_benign | 0.2396 | benign | 0.405 | Stabilizing | 0.267 | N | 0.302 | neutral | N | 0.516557071 | None | None | N |
K/N | 0.3392 | likely_benign | 0.4077 | ambiguous | -0.715 | Destabilizing | 0.801 | D | 0.322 | neutral | D | 0.55264375 | None | None | N |
K/P | 0.8774 | likely_pathogenic | 0.9246 | pathogenic | 0.107 | Stabilizing | 0.974 | D | 0.358 | neutral | None | None | None | None | N |
K/Q | 0.1121 | likely_benign | 0.1185 | benign | -0.799 | Destabilizing | 0.051 | N | 0.196 | neutral | N | 0.498946445 | None | None | N |
K/R | 0.0867 | likely_benign | 0.0889 | benign | -0.804 | Destabilizing | 0.005 | N | 0.081 | neutral | N | 0.501573347 | None | None | N |
K/S | 0.3262 | likely_benign | 0.3888 | ambiguous | -1.311 | Destabilizing | 0.842 | D | 0.291 | neutral | None | None | None | None | N |
K/T | 0.1468 | likely_benign | 0.1605 | benign | -0.985 | Destabilizing | 0.801 | D | 0.315 | neutral | N | 0.515823936 | None | None | N |
K/V | 0.2844 | likely_benign | 0.3111 | benign | 0.107 | Stabilizing | 0.728 | D | 0.357 | neutral | None | None | None | None | N |
K/W | 0.6992 | likely_pathogenic | 0.7408 | pathogenic | -0.271 | Destabilizing | 0.998 | D | 0.447 | neutral | None | None | None | None | N |
K/Y | 0.5242 | ambiguous | 0.5713 | pathogenic | 0.07 | Stabilizing | 0.974 | D | 0.407 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.