Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4664 | 14215;14216;14217 | chr2:178739243;178739242;178739241 | chr2:179603970;179603969;179603968 |
N2AB | 4347 | 13264;13265;13266 | chr2:178739243;178739242;178739241 | chr2:179603970;179603969;179603968 |
N2A | None | None | chr2:None | chr2:None |
N2B | 4301 | 13126;13127;13128 | chr2:178739243;178739242;178739241 | chr2:179603970;179603969;179603968 |
Novex-1 | 4426 | 13501;13502;13503 | chr2:178739243;178739242;178739241 | chr2:179603970;179603969;179603968 |
Novex-2 | 4493 | 13702;13703;13704 | chr2:178739243;178739242;178739241 | chr2:179603970;179603969;179603968 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs767084399 | -0.919 | None | N | 0.045 | 0.126 | None | gnomAD-2.1.1 | 4.18E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.19E-06 | 0 |
D/N | rs767084399 | -0.919 | None | N | 0.045 | 0.126 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.78469E-04 |
D/N | rs767084399 | -0.919 | None | N | 0.045 | 0.126 | None | gnomAD-4.0.0 | 6.27357E-06 | None | None | None | None | N | None | 0 | 1.68982E-05 | None | 0 | 6.75007E-05 | None | 0 | 0 | 1.71365E-06 | 1.13173E-05 | 4.8752E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.149 | likely_benign | 0.1535 | benign | -0.475 | Destabilizing | 0.005 | N | 0.299 | neutral | N | 0.466986724 | None | None | N |
D/C | 0.4147 | ambiguous | 0.4486 | ambiguous | -0.158 | Destabilizing | 0.864 | D | 0.445 | neutral | None | None | None | None | N |
D/E | 0.1397 | likely_benign | 0.1371 | benign | -0.576 | Destabilizing | None | N | 0.079 | neutral | N | 0.444768845 | None | None | N |
D/F | 0.489 | ambiguous | 0.4917 | ambiguous | -0.186 | Destabilizing | 0.214 | N | 0.537 | neutral | None | None | None | None | N |
D/G | 0.1073 | likely_benign | 0.1111 | benign | -0.789 | Destabilizing | 0.005 | N | 0.329 | neutral | N | 0.505075478 | None | None | N |
D/H | 0.1371 | likely_benign | 0.1458 | benign | -0.5 | Destabilizing | None | N | 0.218 | neutral | N | 0.456891461 | None | None | N |
D/I | 0.3599 | ambiguous | 0.3734 | ambiguous | 0.342 | Stabilizing | 0.072 | N | 0.553 | neutral | None | None | None | None | N |
D/K | 0.2098 | likely_benign | 0.2149 | benign | -0.236 | Destabilizing | 0.016 | N | 0.379 | neutral | None | None | None | None | N |
D/L | 0.2883 | likely_benign | 0.2972 | benign | 0.342 | Stabilizing | 0.031 | N | 0.446 | neutral | None | None | None | None | N |
D/M | 0.5178 | ambiguous | 0.5311 | ambiguous | 0.702 | Stabilizing | 0.628 | D | 0.467 | neutral | None | None | None | None | N |
D/N | 0.0715 | likely_benign | 0.0749 | benign | -0.593 | Destabilizing | None | N | 0.045 | neutral | N | 0.422623511 | None | None | N |
D/P | 0.4339 | ambiguous | 0.4664 | ambiguous | 0.095 | Stabilizing | 0.136 | N | 0.435 | neutral | None | None | None | None | N |
D/Q | 0.2002 | likely_benign | 0.2114 | benign | -0.495 | Destabilizing | 0.038 | N | 0.253 | neutral | None | None | None | None | N |
D/R | 0.2093 | likely_benign | 0.2236 | benign | -0.104 | Destabilizing | None | N | 0.225 | neutral | None | None | None | None | N |
D/S | 0.087 | likely_benign | 0.0934 | benign | -0.814 | Destabilizing | None | N | 0.045 | neutral | None | None | None | None | N |
D/T | 0.1924 | likely_benign | 0.1997 | benign | -0.563 | Destabilizing | None | N | 0.072 | neutral | None | None | None | None | N |
D/V | 0.2352 | likely_benign | 0.2427 | benign | 0.095 | Stabilizing | 0.029 | N | 0.517 | neutral | N | 0.497979613 | None | None | N |
D/W | 0.7162 | likely_pathogenic | 0.7347 | pathogenic | -0.024 | Destabilizing | 0.864 | D | 0.463 | neutral | None | None | None | None | N |
D/Y | 0.16 | likely_benign | 0.1668 | benign | 0.046 | Stabilizing | 0.208 | N | 0.551 | neutral | N | 0.513380518 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.