Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4666 | 14221;14222;14223 | chr2:178739237;178739236;178739235 | chr2:179603964;179603963;179603962 |
N2AB | 4349 | 13270;13271;13272 | chr2:178739237;178739236;178739235 | chr2:179603964;179603963;179603962 |
N2A | None | None | chr2:None | chr2:None |
N2B | 4303 | 13132;13133;13134 | chr2:178739237;178739236;178739235 | chr2:179603964;179603963;179603962 |
Novex-1 | 4428 | 13507;13508;13509 | chr2:178739237;178739236;178739235 | chr2:179603964;179603963;179603962 |
Novex-2 | 4495 | 13708;13709;13710 | chr2:178739237;178739236;178739235 | chr2:179603964;179603963;179603962 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1361124171 | -1.021 | 0.565 | D | 0.545 | 0.19 | None | gnomAD-2.1.1 | 4.24E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.3E-06 | 0 |
V/I | rs1361124171 | -1.021 | 0.565 | D | 0.545 | 0.19 | None | gnomAD-4.0.0 | 1.04332E-05 | None | None | None | None | N | None | 0 | 2.292E-05 | None | 0 | 0 | None | 0 | 0 | 1.1851E-05 | 0 | 1.68674E-05 |
V/L | None | None | 0.349 | D | 0.549 | 0.209 | None | gnomAD-4.0.0 | 1.3911E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.82322E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3133 | likely_benign | 0.3338 | benign | -2.331 | Highly Destabilizing | 0.003 | N | 0.295 | neutral | N | 0.513375193 | None | None | N |
V/C | 0.8408 | likely_pathogenic | 0.8408 | pathogenic | -2.326 | Highly Destabilizing | 0.989 | D | 0.649 | neutral | None | None | None | None | N |
V/D | 0.877 | likely_pathogenic | 0.8862 | pathogenic | -3.46 | Highly Destabilizing | 0.923 | D | 0.707 | prob.neutral | None | None | None | None | N |
V/E | 0.8146 | likely_pathogenic | 0.8252 | pathogenic | -3.305 | Highly Destabilizing | 0.901 | D | 0.663 | neutral | D | 0.709504627 | None | None | N |
V/F | 0.5864 | likely_pathogenic | 0.5975 | pathogenic | -1.395 | Destabilizing | 0.961 | D | 0.671 | neutral | None | None | None | None | N |
V/G | 0.4373 | ambiguous | 0.4633 | ambiguous | -2.764 | Highly Destabilizing | 0.565 | D | 0.669 | neutral | D | 0.746696072 | None | None | N |
V/H | 0.9545 | likely_pathogenic | 0.9578 | pathogenic | -2.184 | Highly Destabilizing | 0.996 | D | 0.698 | prob.neutral | None | None | None | None | N |
V/I | 0.1032 | likely_benign | 0.1013 | benign | -1.134 | Destabilizing | 0.565 | D | 0.545 | neutral | D | 0.556922522 | None | None | N |
V/K | 0.8908 | likely_pathogenic | 0.8974 | pathogenic | -1.995 | Destabilizing | 0.923 | D | 0.663 | neutral | None | None | None | None | N |
V/L | 0.4107 | ambiguous | 0.4217 | ambiguous | -1.134 | Destabilizing | 0.349 | N | 0.549 | neutral | D | 0.554466029 | None | None | N |
V/M | 0.353 | ambiguous | 0.3553 | ambiguous | -1.39 | Destabilizing | 0.961 | D | 0.595 | neutral | None | None | None | None | N |
V/N | 0.7699 | likely_pathogenic | 0.7784 | pathogenic | -2.34 | Highly Destabilizing | 0.923 | D | 0.723 | prob.delet. | None | None | None | None | N |
V/P | 0.775 | likely_pathogenic | 0.8314 | pathogenic | -1.509 | Destabilizing | 0.961 | D | 0.687 | prob.neutral | None | None | None | None | N |
V/Q | 0.8672 | likely_pathogenic | 0.8743 | pathogenic | -2.321 | Highly Destabilizing | 0.961 | D | 0.675 | prob.neutral | None | None | None | None | N |
V/R | 0.8639 | likely_pathogenic | 0.8736 | pathogenic | -1.6 | Destabilizing | 0.923 | D | 0.724 | prob.delet. | None | None | None | None | N |
V/S | 0.5826 | likely_pathogenic | 0.5967 | pathogenic | -2.839 | Highly Destabilizing | 0.633 | D | 0.618 | neutral | None | None | None | None | N |
V/T | 0.396 | ambiguous | 0.4115 | ambiguous | -2.568 | Highly Destabilizing | 0.011 | N | 0.399 | neutral | None | None | None | None | N |
V/W | 0.9712 | likely_pathogenic | 0.9715 | pathogenic | -1.8 | Destabilizing | 0.996 | D | 0.691 | prob.neutral | None | None | None | None | N |
V/Y | 0.9036 | likely_pathogenic | 0.9079 | pathogenic | -1.551 | Destabilizing | 0.961 | D | 0.657 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.