Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4729 | 14410;14411;14412 | chr2:178738268;178738267;178738266 | chr2:179602995;179602994;179602993 |
N2AB | 4412 | 13459;13460;13461 | chr2:178738268;178738267;178738266 | chr2:179602995;179602994;179602993 |
N2A | 3485 | 10678;10679;10680 | chr2:178738268;178738267;178738266 | chr2:179602995;179602994;179602993 |
N2B | 4366 | 13321;13322;13323 | chr2:178738268;178738267;178738266 | chr2:179602995;179602994;179602993 |
Novex-1 | 4491 | 13696;13697;13698 | chr2:178738268;178738267;178738266 | chr2:179602995;179602994;179602993 |
Novex-2 | 4558 | 13897;13898;13899 | chr2:178738268;178738267;178738266 | chr2:179602995;179602994;179602993 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1279065978 | -0.627 | 0.898 | N | 0.556 | 0.239 | 0.486209434461 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.61E-05 | None | 0 | None | 0 | 0 | 0 |
V/I | rs1279065978 | -0.627 | 0.898 | N | 0.556 | 0.239 | 0.486209434461 | gnomAD-4.0.0 | 1.59192E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.78195E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4111 | ambiguous | 0.5199 | ambiguous | -1.754 | Destabilizing | 0.977 | D | 0.513 | neutral | N | 0.478388083 | None | None | I |
V/C | 0.8642 | likely_pathogenic | 0.904 | pathogenic | -1.197 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
V/D | 0.9349 | likely_pathogenic | 0.9611 | pathogenic | -1.963 | Destabilizing | 0.999 | D | 0.829 | deleterious | N | 0.443703351 | None | None | I |
V/E | 0.8601 | likely_pathogenic | 0.9044 | pathogenic | -1.828 | Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | I |
V/F | 0.5713 | likely_pathogenic | 0.7429 | pathogenic | -1.144 | Destabilizing | 0.993 | D | 0.795 | deleterious | N | 0.478735164 | None | None | I |
V/G | 0.593 | likely_pathogenic | 0.7105 | pathogenic | -2.217 | Highly Destabilizing | 0.999 | D | 0.811 | deleterious | N | 0.479640412 | None | None | I |
V/H | 0.9579 | likely_pathogenic | 0.9772 | pathogenic | -1.987 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
V/I | 0.1131 | likely_benign | 0.127 | benign | -0.513 | Destabilizing | 0.898 | D | 0.556 | neutral | N | 0.477807057 | None | None | I |
V/K | 0.9125 | likely_pathogenic | 0.9435 | pathogenic | -1.456 | Destabilizing | 0.998 | D | 0.802 | deleterious | None | None | None | None | I |
V/L | 0.4789 | ambiguous | 0.6161 | pathogenic | -0.513 | Destabilizing | 0.117 | N | 0.285 | neutral | N | 0.474423849 | None | None | I |
V/M | 0.4044 | ambiguous | 0.5254 | ambiguous | -0.435 | Destabilizing | 0.995 | D | 0.757 | deleterious | None | None | None | None | I |
V/N | 0.8545 | likely_pathogenic | 0.9069 | pathogenic | -1.515 | Destabilizing | 0.999 | D | 0.822 | deleterious | None | None | None | None | I |
V/P | 0.7977 | likely_pathogenic | 0.8578 | pathogenic | -0.895 | Destabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | I |
V/Q | 0.877 | likely_pathogenic | 0.9209 | pathogenic | -1.479 | Destabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | I |
V/R | 0.8769 | likely_pathogenic | 0.9178 | pathogenic | -1.191 | Destabilizing | 0.998 | D | 0.827 | deleterious | None | None | None | None | I |
V/S | 0.6246 | likely_pathogenic | 0.732 | pathogenic | -2.111 | Highly Destabilizing | 0.998 | D | 0.793 | deleterious | None | None | None | None | I |
V/T | 0.4619 | ambiguous | 0.5516 | ambiguous | -1.844 | Destabilizing | 0.991 | D | 0.662 | neutral | None | None | None | None | I |
V/W | 0.9771 | likely_pathogenic | 0.9905 | pathogenic | -1.586 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | I |
V/Y | 0.9161 | likely_pathogenic | 0.9572 | pathogenic | -1.192 | Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.