Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4737 | 14434;14435;14436 | chr2:178738244;178738243;178738242 | chr2:179602971;179602970;179602969 |
N2AB | 4420 | 13483;13484;13485 | chr2:178738244;178738243;178738242 | chr2:179602971;179602970;179602969 |
N2A | 3493 | 10702;10703;10704 | chr2:178738244;178738243;178738242 | chr2:179602971;179602970;179602969 |
N2B | 4374 | 13345;13346;13347 | chr2:178738244;178738243;178738242 | chr2:179602971;179602970;179602969 |
Novex-1 | 4499 | 13720;13721;13722 | chr2:178738244;178738243;178738242 | chr2:179602971;179602970;179602969 |
Novex-2 | 4566 | 13921;13922;13923 | chr2:178738244;178738243;178738242 | chr2:179602971;179602970;179602969 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/C | None | None | 1.0 | D | 0.764 | 0.536 | 0.647102547044 | gnomAD-4.0.0 | 1.59177E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85858E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.4342 | ambiguous | 0.6273 | pathogenic | -0.286 | Destabilizing | 0.998 | D | 0.47 | neutral | D | 0.630992762 | None | None | I |
G/C | 0.6997 | likely_pathogenic | 0.7936 | pathogenic | -0.934 | Destabilizing | 1.0 | D | 0.764 | deleterious | D | 0.74997377 | None | None | I |
G/D | 0.417 | ambiguous | 0.6062 | pathogenic | -0.519 | Destabilizing | 1.0 | D | 0.62 | neutral | N | 0.502744456 | None | None | I |
G/E | 0.4782 | ambiguous | 0.693 | pathogenic | -0.66 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | I |
G/F | 0.9263 | likely_pathogenic | 0.9642 | pathogenic | -0.915 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
G/H | 0.744 | likely_pathogenic | 0.8635 | pathogenic | -0.382 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | I |
G/I | 0.8998 | likely_pathogenic | 0.9567 | pathogenic | -0.403 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
G/K | 0.7175 | likely_pathogenic | 0.8441 | pathogenic | -0.814 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | I |
G/L | 0.8743 | likely_pathogenic | 0.9383 | pathogenic | -0.403 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | I |
G/M | 0.8893 | likely_pathogenic | 0.9469 | pathogenic | -0.626 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
G/N | 0.4194 | ambiguous | 0.6069 | pathogenic | -0.529 | Destabilizing | 1.0 | D | 0.636 | neutral | None | None | None | None | I |
G/P | 0.9865 | likely_pathogenic | 0.9922 | pathogenic | -0.333 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
G/Q | 0.5555 | ambiguous | 0.7358 | pathogenic | -0.766 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
G/R | 0.5482 | ambiguous | 0.7149 | pathogenic | -0.375 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | D | 0.630859361 | None | None | I |
G/S | 0.1888 | likely_benign | 0.3117 | benign | -0.689 | Destabilizing | 0.991 | D | 0.563 | neutral | D | 0.582363206 | None | None | I |
G/T | 0.593 | likely_pathogenic | 0.7752 | pathogenic | -0.754 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | I |
G/V | 0.8059 | likely_pathogenic | 0.9118 | pathogenic | -0.333 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | D | 0.715862877 | None | None | I |
G/W | 0.8276 | likely_pathogenic | 0.8993 | pathogenic | -1.073 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | I |
G/Y | 0.8529 | likely_pathogenic | 0.9226 | pathogenic | -0.732 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.