Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4742 | 14449;14450;14451 | chr2:178738229;178738228;178738227 | chr2:179602956;179602955;179602954 |
N2AB | 4425 | 13498;13499;13500 | chr2:178738229;178738228;178738227 | chr2:179602956;179602955;179602954 |
N2A | 3498 | 10717;10718;10719 | chr2:178738229;178738228;178738227 | chr2:179602956;179602955;179602954 |
N2B | 4379 | 13360;13361;13362 | chr2:178738229;178738228;178738227 | chr2:179602956;179602955;179602954 |
Novex-1 | 4504 | 13735;13736;13737 | chr2:178738229;178738228;178738227 | chr2:179602956;179602955;179602954 |
Novex-2 | 4571 | 13936;13937;13938 | chr2:178738229;178738228;178738227 | chr2:179602956;179602955;179602954 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.002 | N | 0.099 | 0.113 | 0.253205268125 | gnomAD-4.0.0 | 1.5918E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85869E-06 | 0 | 0 |
E/K | rs781746943 | 0.63 | 0.379 | N | 0.283 | 0.273 | 0.12205267543 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.65E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2456 | likely_benign | 0.3387 | benign | -0.388 | Destabilizing | 0.549 | D | 0.323 | neutral | N | 0.503671358 | None | None | N |
E/C | 0.9514 | likely_pathogenic | 0.9784 | pathogenic | 0.049 | Stabilizing | 0.992 | D | 0.339 | neutral | None | None | None | None | N |
E/D | 0.1576 | likely_benign | 0.2459 | benign | -0.332 | Destabilizing | 0.002 | N | 0.099 | neutral | N | 0.48392928 | None | None | N |
E/F | 0.9206 | likely_pathogenic | 0.961 | pathogenic | -0.314 | Destabilizing | 0.92 | D | 0.329 | neutral | None | None | None | None | N |
E/G | 0.2624 | likely_benign | 0.3926 | ambiguous | -0.559 | Destabilizing | 0.549 | D | 0.349 | neutral | N | 0.507276806 | None | None | N |
E/H | 0.6938 | likely_pathogenic | 0.823 | pathogenic | -0.069 | Destabilizing | 0.005 | N | 0.103 | neutral | None | None | None | None | N |
E/I | 0.7104 | likely_pathogenic | 0.8265 | pathogenic | 0.025 | Stabilizing | 0.92 | D | 0.342 | neutral | None | None | None | None | N |
E/K | 0.3085 | likely_benign | 0.439 | ambiguous | 0.489 | Stabilizing | 0.379 | N | 0.283 | neutral | N | 0.51091066 | None | None | N |
E/L | 0.6826 | likely_pathogenic | 0.8086 | pathogenic | 0.025 | Stabilizing | 0.617 | D | 0.34 | neutral | None | None | None | None | N |
E/M | 0.7598 | likely_pathogenic | 0.8624 | pathogenic | 0.167 | Stabilizing | 0.992 | D | 0.302 | neutral | None | None | None | None | N |
E/N | 0.3975 | ambiguous | 0.5922 | pathogenic | 0.092 | Stabilizing | 0.447 | N | 0.249 | neutral | None | None | None | None | N |
E/P | 0.4873 | ambiguous | 0.6594 | pathogenic | -0.093 | Destabilizing | 0.92 | D | 0.331 | neutral | None | None | None | None | N |
E/Q | 0.225 | likely_benign | 0.3147 | benign | 0.134 | Stabilizing | 0.045 | N | 0.117 | neutral | N | 0.469965018 | None | None | N |
E/R | 0.4588 | ambiguous | 0.5983 | pathogenic | 0.603 | Stabilizing | 0.617 | D | 0.29 | neutral | None | None | None | None | N |
E/S | 0.3018 | likely_benign | 0.4457 | ambiguous | -0.011 | Destabilizing | 0.617 | D | 0.259 | neutral | None | None | None | None | N |
E/T | 0.4151 | ambiguous | 0.5881 | pathogenic | 0.142 | Stabilizing | 0.617 | D | 0.367 | neutral | None | None | None | None | N |
E/V | 0.4694 | ambiguous | 0.6097 | pathogenic | -0.093 | Destabilizing | 0.712 | D | 0.335 | neutral | N | 0.515563623 | None | None | N |
E/W | 0.9707 | likely_pathogenic | 0.9884 | pathogenic | -0.168 | Destabilizing | 0.992 | D | 0.371 | neutral | None | None | None | None | N |
E/Y | 0.8402 | likely_pathogenic | 0.9213 | pathogenic | -0.069 | Destabilizing | 0.85 | D | 0.327 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.