Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4759 | 14500;14501;14502 | chr2:178738178;178738177;178738176 | chr2:179602905;179602904;179602903 |
N2AB | 4442 | 13549;13550;13551 | chr2:178738178;178738177;178738176 | chr2:179602905;179602904;179602903 |
N2A | 3515 | 10768;10769;10770 | chr2:178738178;178738177;178738176 | chr2:179602905;179602904;179602903 |
N2B | 4396 | 13411;13412;13413 | chr2:178738178;178738177;178738176 | chr2:179602905;179602904;179602903 |
Novex-1 | 4521 | 13786;13787;13788 | chr2:178738178;178738177;178738176 | chr2:179602905;179602904;179602903 |
Novex-2 | 4588 | 13987;13988;13989 | chr2:178738178;178738177;178738176 | chr2:179602905;179602904;179602903 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.896 | N | 0.765 | 0.78 | 0.799649619666 | gnomAD-4.0.0 | 1.59142E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85834E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9922 | likely_pathogenic | 0.9896 | pathogenic | -2.795 | Highly Destabilizing | 0.702 | D | 0.719 | prob.delet. | None | None | None | None | N |
I/C | 0.9899 | likely_pathogenic | 0.9857 | pathogenic | -2.056 | Highly Destabilizing | 0.999 | D | 0.768 | deleterious | None | None | None | None | N |
I/D | 0.9986 | likely_pathogenic | 0.9976 | pathogenic | -2.903 | Highly Destabilizing | 0.996 | D | 0.861 | deleterious | None | None | None | None | N |
I/E | 0.9974 | likely_pathogenic | 0.996 | pathogenic | -2.716 | Highly Destabilizing | 0.988 | D | 0.859 | deleterious | None | None | None | None | N |
I/F | 0.6236 | likely_pathogenic | 0.6352 | pathogenic | -1.713 | Destabilizing | 0.968 | D | 0.737 | prob.delet. | N | 0.511481024 | None | None | N |
I/G | 0.9978 | likely_pathogenic | 0.9968 | pathogenic | -3.326 | Highly Destabilizing | 0.988 | D | 0.852 | deleterious | None | None | None | None | N |
I/H | 0.9928 | likely_pathogenic | 0.9893 | pathogenic | -2.586 | Highly Destabilizing | 0.999 | D | 0.846 | deleterious | None | None | None | None | N |
I/K | 0.9923 | likely_pathogenic | 0.9887 | pathogenic | -2.206 | Highly Destabilizing | 0.988 | D | 0.859 | deleterious | None | None | None | None | N |
I/L | 0.3108 | likely_benign | 0.3264 | benign | -1.272 | Destabilizing | 0.011 | N | 0.311 | neutral | N | 0.429817906 | None | None | N |
I/M | 0.4289 | ambiguous | 0.4141 | ambiguous | -1.112 | Destabilizing | 0.968 | D | 0.699 | prob.neutral | N | 0.511612807 | None | None | N |
I/N | 0.9736 | likely_pathogenic | 0.9564 | pathogenic | -2.423 | Highly Destabilizing | 0.995 | D | 0.853 | deleterious | N | 0.511318422 | None | None | N |
I/P | 0.9988 | likely_pathogenic | 0.9979 | pathogenic | -1.76 | Destabilizing | 0.996 | D | 0.859 | deleterious | None | None | None | None | N |
I/Q | 0.9946 | likely_pathogenic | 0.9927 | pathogenic | -2.366 | Highly Destabilizing | 0.996 | D | 0.867 | deleterious | None | None | None | None | N |
I/R | 0.9905 | likely_pathogenic | 0.9864 | pathogenic | -1.738 | Destabilizing | 0.996 | D | 0.856 | deleterious | None | None | None | None | N |
I/S | 0.9901 | likely_pathogenic | 0.9842 | pathogenic | -3.166 | Highly Destabilizing | 0.984 | D | 0.819 | deleterious | N | 0.511318422 | None | None | N |
I/T | 0.9923 | likely_pathogenic | 0.9878 | pathogenic | -2.837 | Highly Destabilizing | 0.896 | D | 0.765 | deleterious | N | 0.511229993 | None | None | N |
I/V | 0.3013 | likely_benign | 0.2934 | benign | -1.76 | Destabilizing | 0.011 | N | 0.258 | neutral | N | 0.512012923 | None | None | N |
I/W | 0.9879 | likely_pathogenic | 0.9866 | pathogenic | -2.031 | Highly Destabilizing | 0.999 | D | 0.84 | deleterious | None | None | None | None | N |
I/Y | 0.9355 | likely_pathogenic | 0.9198 | pathogenic | -1.816 | Destabilizing | 0.996 | D | 0.775 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.