Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4762 | 14509;14510;14511 | chr2:178738169;178738168;178738167 | chr2:179602896;179602895;179602894 |
N2AB | 4445 | 13558;13559;13560 | chr2:178738169;178738168;178738167 | chr2:179602896;179602895;179602894 |
N2A | 3518 | 10777;10778;10779 | chr2:178738169;178738168;178738167 | chr2:179602896;179602895;179602894 |
N2B | 4399 | 13420;13421;13422 | chr2:178738169;178738168;178738167 | chr2:179602896;179602895;179602894 |
Novex-1 | 4524 | 13795;13796;13797 | chr2:178738169;178738168;178738167 | chr2:179602896;179602895;179602894 |
Novex-2 | 4591 | 13996;13997;13998 | chr2:178738169;178738168;178738167 | chr2:179602896;179602895;179602894 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs2081863914 | None | 0.934 | N | 0.55 | 0.346 | 0.453679287548 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
T/P | rs1439059332 | None | 0.002 | N | 0.248 | 0.349 | 0.28297238246 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/P | rs1439059332 | None | 0.002 | N | 0.248 | 0.349 | 0.28297238246 | gnomAD-4.0.0 | 1.85937E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54289E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1766 | likely_benign | 0.1718 | benign | -1.075 | Destabilizing | 0.005 | N | 0.152 | neutral | N | 0.450753441 | None | None | I |
T/C | 0.5666 | likely_pathogenic | 0.5756 | pathogenic | -1.312 | Destabilizing | 0.998 | D | 0.509 | neutral | None | None | None | None | I |
T/D | 0.9841 | likely_pathogenic | 0.9757 | pathogenic | -2.261 | Highly Destabilizing | 0.915 | D | 0.509 | neutral | None | None | None | None | I |
T/E | 0.9695 | likely_pathogenic | 0.963 | pathogenic | -2.11 | Highly Destabilizing | 0.842 | D | 0.493 | neutral | None | None | None | None | I |
T/F | 0.9732 | likely_pathogenic | 0.9643 | pathogenic | -0.939 | Destabilizing | 0.991 | D | 0.539 | neutral | None | None | None | None | I |
T/G | 0.7472 | likely_pathogenic | 0.7155 | pathogenic | -1.404 | Destabilizing | 0.728 | D | 0.397 | neutral | None | None | None | None | I |
T/H | 0.9613 | likely_pathogenic | 0.9477 | pathogenic | -1.542 | Destabilizing | 0.998 | D | 0.515 | neutral | None | None | None | None | I |
T/I | 0.7429 | likely_pathogenic | 0.6856 | pathogenic | -0.242 | Destabilizing | 0.934 | D | 0.55 | neutral | N | 0.471325082 | None | None | I |
T/K | 0.9696 | likely_pathogenic | 0.9656 | pathogenic | -0.871 | Destabilizing | 0.842 | D | 0.501 | neutral | None | None | None | None | I |
T/L | 0.4012 | ambiguous | 0.4109 | ambiguous | -0.242 | Destabilizing | 0.842 | D | 0.418 | neutral | None | None | None | None | I |
T/M | 0.3938 | ambiguous | 0.3727 | ambiguous | -0.276 | Destabilizing | 0.998 | D | 0.523 | neutral | None | None | None | None | I |
T/N | 0.7494 | likely_pathogenic | 0.6566 | pathogenic | -1.561 | Destabilizing | 0.966 | D | 0.519 | neutral | N | 0.478735164 | None | None | I |
T/P | 0.261 | likely_benign | 0.2145 | benign | -0.49 | Destabilizing | 0.002 | N | 0.248 | neutral | N | 0.478735164 | None | None | I |
T/Q | 0.938 | likely_pathogenic | 0.9301 | pathogenic | -1.524 | Destabilizing | 0.974 | D | 0.541 | neutral | None | None | None | None | I |
T/R | 0.9564 | likely_pathogenic | 0.9509 | pathogenic | -0.837 | Destabilizing | 0.974 | D | 0.548 | neutral | None | None | None | None | I |
T/S | 0.3477 | ambiguous | 0.278 | benign | -1.621 | Destabilizing | 0.454 | N | 0.43 | neutral | N | 0.477807057 | None | None | I |
T/V | 0.4134 | ambiguous | 0.4206 | ambiguous | -0.49 | Destabilizing | 0.728 | D | 0.395 | neutral | None | None | None | None | I |
T/W | 0.9951 | likely_pathogenic | 0.9935 | pathogenic | -1.115 | Destabilizing | 0.998 | D | 0.543 | neutral | None | None | None | None | I |
T/Y | 0.9799 | likely_pathogenic | 0.9728 | pathogenic | -0.715 | Destabilizing | 0.991 | D | 0.541 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.