Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4767 | 14524;14525;14526 | chr2:178738154;178738153;178738152 | chr2:179602881;179602880;179602879 |
N2AB | 4450 | 13573;13574;13575 | chr2:178738154;178738153;178738152 | chr2:179602881;179602880;179602879 |
N2A | 3523 | 10792;10793;10794 | chr2:178738154;178738153;178738152 | chr2:179602881;179602880;179602879 |
N2B | 4404 | 13435;13436;13437 | chr2:178738154;178738153;178738152 | chr2:179602881;179602880;179602879 |
Novex-1 | 4529 | 13810;13811;13812 | chr2:178738154;178738153;178738152 | chr2:179602881;179602880;179602879 |
Novex-2 | 4596 | 14011;14012;14013 | chr2:178738154;178738153;178738152 | chr2:179602881;179602880;179602879 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | rs1175326019 | None | 0.996 | N | 0.591 | 0.348 | 0.775817181622 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.4071 | ambiguous | 0.4067 | ambiguous | -1.281 | Destabilizing | 0.079 | N | 0.095 | neutral | None | None | None | None | I |
C/D | 0.7909 | likely_pathogenic | 0.841 | pathogenic | 0.406 | Stabilizing | 0.939 | D | 0.605 | neutral | None | None | None | None | I |
C/E | 0.8332 | likely_pathogenic | 0.828 | pathogenic | 0.451 | Stabilizing | 0.939 | D | 0.603 | neutral | None | None | None | None | I |
C/F | 0.4846 | ambiguous | 0.5018 | ambiguous | -0.912 | Destabilizing | 0.996 | D | 0.597 | neutral | N | 0.477807057 | None | None | I |
C/G | 0.2267 | likely_benign | 0.2564 | benign | -1.528 | Destabilizing | 0.826 | D | 0.48 | neutral | N | 0.42288028 | None | None | I |
C/H | 0.71 | likely_pathogenic | 0.7117 | pathogenic | -1.609 | Destabilizing | 0.999 | D | 0.567 | neutral | None | None | None | None | I |
C/I | 0.7203 | likely_pathogenic | 0.7113 | pathogenic | -0.685 | Destabilizing | 0.969 | D | 0.582 | neutral | None | None | None | None | I |
C/K | 0.8631 | likely_pathogenic | 0.8593 | pathogenic | -0.322 | Destabilizing | 0.939 | D | 0.577 | neutral | None | None | None | None | I |
C/L | 0.6886 | likely_pathogenic | 0.7031 | pathogenic | -0.685 | Destabilizing | 0.863 | D | 0.506 | neutral | None | None | None | None | I |
C/M | 0.7425 | likely_pathogenic | 0.737 | pathogenic | -0.128 | Destabilizing | 0.997 | D | 0.581 | neutral | None | None | None | None | I |
C/N | 0.5987 | likely_pathogenic | 0.6523 | pathogenic | -0.136 | Destabilizing | 0.939 | D | 0.601 | neutral | None | None | None | None | I |
C/P | 0.9877 | likely_pathogenic | 0.9899 | pathogenic | -0.857 | Destabilizing | 0.991 | D | 0.616 | neutral | None | None | None | None | I |
C/Q | 0.6946 | likely_pathogenic | 0.6837 | pathogenic | -0.145 | Destabilizing | 0.991 | D | 0.617 | neutral | None | None | None | None | I |
C/R | 0.5383 | ambiguous | 0.519 | ambiguous | -0.204 | Destabilizing | 0.988 | D | 0.616 | neutral | N | 0.42698487 | None | None | I |
C/S | 0.2566 | likely_benign | 0.2779 | benign | -0.703 | Destabilizing | 0.159 | N | 0.19 | neutral | N | 0.287130502 | None | None | I |
C/T | 0.4257 | ambiguous | 0.4654 | ambiguous | -0.486 | Destabilizing | 0.759 | D | 0.506 | neutral | None | None | None | None | I |
C/V | 0.5922 | likely_pathogenic | 0.6182 | pathogenic | -0.857 | Destabilizing | 0.939 | D | 0.591 | neutral | None | None | None | None | I |
C/W | 0.7969 | likely_pathogenic | 0.8024 | pathogenic | -0.854 | Destabilizing | 1.0 | D | 0.576 | neutral | N | 0.508640785 | None | None | I |
C/Y | 0.6104 | likely_pathogenic | 0.6357 | pathogenic | -0.792 | Destabilizing | 0.996 | D | 0.591 | neutral | N | 0.447357958 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.