Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4773 | 14542;14543;14544 | chr2:178738136;178738135;178738134 | chr2:179602863;179602862;179602861 |
N2AB | 4456 | 13591;13592;13593 | chr2:178738136;178738135;178738134 | chr2:179602863;179602862;179602861 |
N2A | 3529 | 10810;10811;10812 | chr2:178738136;178738135;178738134 | chr2:179602863;179602862;179602861 |
N2B | 4410 | 13453;13454;13455 | chr2:178738136;178738135;178738134 | chr2:179602863;179602862;179602861 |
Novex-1 | 4535 | 13828;13829;13830 | chr2:178738136;178738135;178738134 | chr2:179602863;179602862;179602861 |
Novex-2 | 4602 | 14029;14030;14031 | chr2:178738136;178738135;178738134 | chr2:179602863;179602862;179602861 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.698 | N | 0.588 | 0.352 | 0.281780670237 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
K/R | None | None | 0.014 | N | 0.379 | 0.2 | 0.349647731962 | gnomAD-4.0.0 | 1.59133E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85838E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6246 | likely_pathogenic | 0.8119 | pathogenic | -0.982 | Destabilizing | 0.754 | D | 0.652 | neutral | None | None | None | None | N |
K/C | 0.8306 | likely_pathogenic | 0.9077 | pathogenic | -1.151 | Destabilizing | 0.998 | D | 0.72 | prob.delet. | None | None | None | None | N |
K/D | 0.9184 | likely_pathogenic | 0.9714 | pathogenic | -0.406 | Destabilizing | 0.956 | D | 0.72 | prob.delet. | None | None | None | None | N |
K/E | 0.2774 | likely_benign | 0.5169 | ambiguous | -0.288 | Destabilizing | 0.698 | D | 0.588 | neutral | N | 0.467255555 | None | None | N |
K/F | 0.8717 | likely_pathogenic | 0.9449 | pathogenic | -0.9 | Destabilizing | 0.998 | D | 0.763 | deleterious | None | None | None | None | N |
K/G | 0.8661 | likely_pathogenic | 0.947 | pathogenic | -1.324 | Destabilizing | 0.86 | D | 0.71 | prob.delet. | None | None | None | None | N |
K/H | 0.4623 | ambiguous | 0.6197 | pathogenic | -1.68 | Destabilizing | 0.994 | D | 0.723 | prob.delet. | None | None | None | None | N |
K/I | 0.308 | likely_benign | 0.4715 | ambiguous | -0.093 | Destabilizing | 0.971 | D | 0.769 | deleterious | N | 0.468522568 | None | None | N |
K/L | 0.4238 | ambiguous | 0.6263 | pathogenic | -0.093 | Destabilizing | 0.86 | D | 0.71 | prob.delet. | None | None | None | None | N |
K/M | 0.2566 | likely_benign | 0.3996 | ambiguous | -0.088 | Destabilizing | 0.994 | D | 0.721 | prob.delet. | None | None | None | None | N |
K/N | 0.7523 | likely_pathogenic | 0.8998 | pathogenic | -0.701 | Destabilizing | 0.942 | D | 0.661 | neutral | N | 0.468322411 | None | None | N |
K/P | 0.9917 | likely_pathogenic | 0.9967 | pathogenic | -0.362 | Destabilizing | 0.978 | D | 0.757 | deleterious | None | None | None | None | N |
K/Q | 0.173 | likely_benign | 0.2725 | benign | -0.859 | Destabilizing | 0.126 | N | 0.332 | neutral | N | 0.428987201 | None | None | N |
K/R | 0.1002 | likely_benign | 0.1163 | benign | -0.619 | Destabilizing | 0.014 | N | 0.379 | neutral | N | 0.467255555 | None | None | N |
K/S | 0.7116 | likely_pathogenic | 0.8709 | pathogenic | -1.472 | Destabilizing | 0.754 | D | 0.613 | neutral | None | None | None | None | N |
K/T | 0.2657 | likely_benign | 0.4313 | ambiguous | -1.141 | Destabilizing | 0.942 | D | 0.715 | prob.delet. | N | 0.443383317 | None | None | N |
K/V | 0.2947 | likely_benign | 0.4442 | ambiguous | -0.362 | Destabilizing | 0.956 | D | 0.744 | deleterious | None | None | None | None | N |
K/W | 0.8854 | likely_pathogenic | 0.945 | pathogenic | -0.705 | Destabilizing | 0.998 | D | 0.683 | prob.neutral | None | None | None | None | N |
K/Y | 0.7812 | likely_pathogenic | 0.8934 | pathogenic | -0.365 | Destabilizing | 0.978 | D | 0.771 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.