Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4806 | 14641;14642;14643 | chr2:178736030;178736029;178736028 | chr2:179600757;179600756;179600755 |
N2AB | 4489 | 13690;13691;13692 | chr2:178736030;178736029;178736028 | chr2:179600757;179600756;179600755 |
N2A | 3562 | 10909;10910;10911 | chr2:178736030;178736029;178736028 | chr2:179600757;179600756;179600755 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs2081384233 | None | 0.454 | N | 0.387 | 0.234 | 0.242244723065 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/A | rs2081384233 | None | 0.454 | N | 0.387 | 0.234 | 0.242244723065 | gnomAD-4.0.0 | 6.57479E-06 | None | None | None | None | N | None | 0 | 6.55222E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | None | None | 0.669 | N | 0.513 | 0.218 | 0.437100570223 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0769 | likely_benign | 0.075 | benign | -0.794 | Destabilizing | 0.454 | N | 0.387 | neutral | N | 0.429303769 | None | None | N |
T/C | 0.4203 | ambiguous | 0.4172 | ambiguous | -0.316 | Destabilizing | 0.998 | D | 0.533 | neutral | None | None | None | None | N |
T/D | 0.6536 | likely_pathogenic | 0.7641 | pathogenic | -0.505 | Destabilizing | 0.842 | D | 0.556 | neutral | None | None | None | None | N |
T/E | 0.5721 | likely_pathogenic | 0.703 | pathogenic | -0.303 | Destabilizing | 0.842 | D | 0.561 | neutral | None | None | None | None | N |
T/F | 0.4606 | ambiguous | 0.5645 | pathogenic | -0.51 | Destabilizing | 0.949 | D | 0.584 | neutral | None | None | None | None | N |
T/G | 0.3082 | likely_benign | 0.325 | benign | -1.209 | Destabilizing | 0.728 | D | 0.519 | neutral | None | None | None | None | N |
T/H | 0.4921 | ambiguous | 0.5835 | pathogenic | -1.173 | Destabilizing | 0.998 | D | 0.521 | neutral | None | None | None | None | N |
T/I | 0.2551 | likely_benign | 0.2962 | benign | 0.29 | Stabilizing | 0.669 | D | 0.513 | neutral | N | 0.391881639 | None | None | N |
T/K | 0.4879 | ambiguous | 0.6548 | pathogenic | 0.064 | Stabilizing | 0.842 | D | 0.558 | neutral | None | None | None | None | N |
T/L | 0.1429 | likely_benign | 0.1652 | benign | 0.29 | Stabilizing | 0.007 | N | 0.258 | neutral | None | None | None | None | N |
T/M | 0.1231 | likely_benign | 0.1424 | benign | 0.123 | Stabilizing | 0.949 | D | 0.571 | neutral | None | None | None | None | N |
T/N | 0.2508 | likely_benign | 0.3021 | benign | -0.589 | Destabilizing | 0.801 | D | 0.511 | neutral | N | 0.510874668 | None | None | N |
T/P | 0.5573 | ambiguous | 0.7341 | pathogenic | -0.04 | Destabilizing | 0.966 | D | 0.613 | neutral | D | 0.546132476 | None | None | N |
T/Q | 0.4397 | ambiguous | 0.5489 | ambiguous | -0.341 | Destabilizing | 0.974 | D | 0.603 | neutral | None | None | None | None | N |
T/R | 0.3673 | ambiguous | 0.5333 | ambiguous | -0.203 | Destabilizing | 0.949 | D | 0.613 | neutral | None | None | None | None | N |
T/S | 0.1462 | likely_benign | 0.1439 | benign | -0.922 | Destabilizing | 0.022 | N | 0.141 | neutral | N | 0.49524449 | None | None | N |
T/V | 0.1667 | likely_benign | 0.1742 | benign | -0.04 | Destabilizing | 0.525 | D | 0.407 | neutral | None | None | None | None | N |
T/W | 0.8405 | likely_pathogenic | 0.9069 | pathogenic | -0.628 | Destabilizing | 0.998 | D | 0.518 | neutral | None | None | None | None | N |
T/Y | 0.4859 | ambiguous | 0.5917 | pathogenic | -0.202 | Destabilizing | 0.991 | D | 0.575 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.