Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4824 | 14695;14696;14697 | chr2:178735976;178735975;178735974 | chr2:179600703;179600702;179600701 |
N2AB | 4507 | 13744;13745;13746 | chr2:178735976;178735975;178735974 | chr2:179600703;179600702;179600701 |
N2A | 3580 | 10963;10964;10965 | chr2:178735976;178735975;178735974 | chr2:179600703;179600702;179600701 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.959 | D | 0.569 | 0.4 | 0.75913351157 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
I/V | rs772792515 | -1.411 | 0.509 | D | 0.361 | 0.31 | 0.627389779515 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
I/V | rs772792515 | -1.411 | 0.509 | D | 0.361 | 0.31 | 0.627389779515 | gnomAD-4.0.0 | 1.5913E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77423E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3784 | ambiguous | 0.3403 | ambiguous | -2.0 | Highly Destabilizing | 0.863 | D | 0.522 | neutral | None | None | None | None | I |
I/C | 0.8945 | likely_pathogenic | 0.8714 | pathogenic | -1.229 | Destabilizing | 0.999 | D | 0.596 | neutral | None | None | None | None | I |
I/D | 0.9644 | likely_pathogenic | 0.9565 | pathogenic | -2.026 | Highly Destabilizing | 0.997 | D | 0.673 | neutral | None | None | None | None | I |
I/E | 0.8954 | likely_pathogenic | 0.8854 | pathogenic | -2.017 | Highly Destabilizing | 0.997 | D | 0.673 | neutral | None | None | None | None | I |
I/F | 0.4294 | ambiguous | 0.3738 | ambiguous | -1.558 | Destabilizing | 0.939 | D | 0.575 | neutral | None | None | None | None | I |
I/G | 0.8535 | likely_pathogenic | 0.8293 | pathogenic | -2.339 | Highly Destabilizing | 0.991 | D | 0.677 | prob.neutral | None | None | None | None | I |
I/H | 0.9045 | likely_pathogenic | 0.8861 | pathogenic | -1.699 | Destabilizing | 0.999 | D | 0.623 | neutral | None | None | None | None | I |
I/K | 0.7811 | likely_pathogenic | 0.7687 | pathogenic | -1.375 | Destabilizing | 0.988 | D | 0.683 | prob.neutral | D | 0.727542817 | None | None | I |
I/L | 0.2222 | likely_benign | 0.1877 | benign | -1.116 | Destabilizing | 0.015 | N | 0.107 | neutral | D | 0.664222765 | None | None | I |
I/M | 0.1387 | likely_benign | 0.1183 | benign | -0.821 | Destabilizing | 0.31 | N | 0.21 | neutral | D | 0.690124005 | None | None | I |
I/N | 0.7335 | likely_pathogenic | 0.7041 | pathogenic | -1.212 | Destabilizing | 0.997 | D | 0.685 | prob.neutral | None | None | None | None | I |
I/P | 0.6328 | likely_pathogenic | 0.6351 | pathogenic | -1.383 | Destabilizing | 0.997 | D | 0.683 | prob.neutral | None | None | None | None | I |
I/Q | 0.8095 | likely_pathogenic | 0.7877 | pathogenic | -1.431 | Destabilizing | 0.991 | D | 0.685 | prob.neutral | None | None | None | None | I |
I/R | 0.6777 | likely_pathogenic | 0.6548 | pathogenic | -0.785 | Destabilizing | 0.988 | D | 0.673 | neutral | D | 0.785699315 | None | None | I |
I/S | 0.5449 | ambiguous | 0.5147 | ambiguous | -1.754 | Destabilizing | 0.969 | D | 0.614 | neutral | None | None | None | None | I |
I/T | 0.2048 | likely_benign | 0.1844 | benign | -1.636 | Destabilizing | 0.959 | D | 0.569 | neutral | D | 0.643467047 | None | None | I |
I/V | 0.1171 | likely_benign | 0.1091 | benign | -1.383 | Destabilizing | 0.509 | D | 0.361 | neutral | D | 0.666091924 | None | None | I |
I/W | 0.9415 | likely_pathogenic | 0.9212 | pathogenic | -1.688 | Destabilizing | 0.999 | D | 0.627 | neutral | None | None | None | None | I |
I/Y | 0.8786 | likely_pathogenic | 0.8452 | pathogenic | -1.459 | Destabilizing | 0.997 | D | 0.649 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.