Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4825 | 14698;14699;14700 | chr2:178735973;178735972;178735971 | chr2:179600700;179600699;179600698 |
N2AB | 4508 | 13747;13748;13749 | chr2:178735973;178735972;178735971 | chr2:179600700;179600699;179600698 |
N2A | 3581 | 10966;10967;10968 | chr2:178735973;178735972;178735971 | chr2:179600700;179600699;179600698 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs769228664 | -0.262 | 0.006 | N | 0.241 | 0.246 | 0.353548585375 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/A | rs769228664 | -0.262 | 0.006 | N | 0.241 | 0.246 | 0.353548585375 | gnomAD-4.0.0 | 6.8421E-07 | None | None | None | None | I | None | 0 | 2.23624E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/V | None | None | 0.324 | N | 0.55 | 0.303 | 0.556811950826 | gnomAD-4.0.0 | 2.05263E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31873E-05 | 1.65656E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2651 | likely_benign | 0.219 | benign | -0.307 | Destabilizing | 0.006 | N | 0.241 | neutral | N | 0.512456368 | None | None | I |
E/C | 0.9258 | likely_pathogenic | 0.882 | pathogenic | -0.022 | Destabilizing | 0.981 | D | 0.509 | neutral | None | None | None | None | I |
E/D | 0.1452 | likely_benign | 0.1241 | benign | -0.364 | Destabilizing | None | N | 0.107 | neutral | N | 0.478171916 | None | None | I |
E/F | 0.8816 | likely_pathogenic | 0.8348 | pathogenic | -0.172 | Destabilizing | 0.932 | D | 0.525 | neutral | None | None | None | None | I |
E/G | 0.274 | likely_benign | 0.2131 | benign | -0.504 | Destabilizing | 0.165 | N | 0.455 | neutral | D | 0.566482757 | None | None | I |
E/H | 0.5123 | ambiguous | 0.4199 | ambiguous | 0.056 | Stabilizing | 0.818 | D | 0.487 | neutral | None | None | None | None | I |
E/I | 0.6435 | likely_pathogenic | 0.5536 | ambiguous | 0.176 | Stabilizing | 0.818 | D | 0.549 | neutral | None | None | None | None | I |
E/K | 0.1904 | likely_benign | 0.1403 | benign | 0.422 | Stabilizing | 0.324 | N | 0.442 | neutral | N | 0.398710167 | None | None | I |
E/L | 0.6312 | likely_pathogenic | 0.5527 | ambiguous | 0.176 | Stabilizing | 0.388 | N | 0.556 | neutral | None | None | None | None | I |
E/M | 0.6867 | likely_pathogenic | 0.5981 | pathogenic | 0.215 | Stabilizing | 0.981 | D | 0.504 | neutral | None | None | None | None | I |
E/N | 0.3047 | likely_benign | 0.2443 | benign | 0.036 | Stabilizing | 0.004 | N | 0.123 | neutral | None | None | None | None | I |
E/P | 0.9116 | likely_pathogenic | 0.8251 | pathogenic | 0.035 | Stabilizing | 0.818 | D | 0.551 | neutral | None | None | None | None | I |
E/Q | 0.1705 | likely_benign | 0.1353 | benign | 0.08 | Stabilizing | 0.324 | N | 0.47 | neutral | N | 0.49834967 | None | None | I |
E/R | 0.3296 | likely_benign | 0.2472 | benign | 0.596 | Stabilizing | 0.388 | N | 0.492 | neutral | None | None | None | None | I |
E/S | 0.2679 | likely_benign | 0.2173 | benign | -0.09 | Destabilizing | 0.116 | N | 0.444 | neutral | None | None | None | None | I |
E/T | 0.3082 | likely_benign | 0.2461 | benign | 0.075 | Stabilizing | 0.388 | N | 0.501 | neutral | None | None | None | None | I |
E/V | 0.4143 | ambiguous | 0.3351 | benign | 0.035 | Stabilizing | 0.324 | N | 0.55 | neutral | N | 0.507135149 | None | None | I |
E/W | 0.9507 | likely_pathogenic | 0.9177 | pathogenic | -0.025 | Destabilizing | 0.981 | D | 0.593 | neutral | None | None | None | None | I |
E/Y | 0.7553 | likely_pathogenic | 0.6777 | pathogenic | 0.075 | Stabilizing | 0.932 | D | 0.526 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.