Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4832 | 14719;14720;14721 | chr2:178735952;178735951;178735950 | chr2:179600679;179600678;179600677 |
N2AB | 4515 | 13768;13769;13770 | chr2:178735952;178735951;178735950 | chr2:179600679;179600678;179600677 |
N2A | 3588 | 10987;10988;10989 | chr2:178735952;178735951;178735950 | chr2:179600679;179600678;179600677 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | rs1485727928 | -0.83 | 0.995 | N | 0.668 | 0.424 | 0.252681307341 | gnomAD-2.1.1 | 1.07E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.53925E-04 | None | 0 | None | 0 | 0 | 0 |
G/D | rs1485727928 | -0.83 | 0.995 | N | 0.668 | 0.424 | 0.252681307341 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92753E-04 | None | 0 | 0 | 0 | 0 | 0 |
G/D | rs1485727928 | -0.83 | 0.995 | N | 0.668 | 0.424 | 0.252681307341 | gnomAD-4.0.0 | 5.12409E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 7.27484E-05 | None | 0 | 0 | 0 | 0 | 2.84382E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2146 | likely_benign | 0.1504 | benign | -0.255 | Destabilizing | 0.996 | D | 0.509 | neutral | D | 0.562608104 | None | None | N |
G/C | 0.3337 | likely_benign | 0.2594 | benign | -0.898 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | D | 0.717100599 | None | None | N |
G/D | 0.2416 | likely_benign | 0.2799 | benign | -0.699 | Destabilizing | 0.995 | D | 0.668 | neutral | N | 0.472046325 | None | None | N |
G/E | 0.2622 | likely_benign | 0.1976 | benign | -0.872 | Destabilizing | 0.998 | D | 0.649 | neutral | None | None | None | None | N |
G/F | 0.6946 | likely_pathogenic | 0.5384 | ambiguous | -1.087 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
G/H | 0.4306 | ambiguous | 0.3079 | benign | -0.375 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
G/I | 0.4948 | ambiguous | 0.3385 | benign | -0.528 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
G/K | 0.4164 | ambiguous | 0.3096 | benign | -0.649 | Destabilizing | 0.998 | D | 0.653 | neutral | None | None | None | None | N |
G/L | 0.6029 | likely_pathogenic | 0.438 | ambiguous | -0.528 | Destabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | N |
G/M | 0.6047 | likely_pathogenic | 0.4518 | ambiguous | -0.528 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
G/N | 0.2826 | likely_benign | 0.1849 | benign | -0.357 | Destabilizing | 0.683 | D | 0.372 | neutral | None | None | None | None | N |
G/P | 0.9526 | likely_pathogenic | 0.8979 | pathogenic | -0.41 | Destabilizing | 1.0 | D | 0.654 | neutral | None | None | None | None | N |
G/Q | 0.3542 | ambiguous | 0.2629 | benign | -0.672 | Destabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | N |
G/R | 0.2586 | likely_benign | 0.2018 | benign | -0.182 | Destabilizing | 0.999 | D | 0.628 | neutral | D | 0.599530278 | None | None | N |
G/S | 0.1242 | likely_benign | 0.0934 | benign | -0.462 | Destabilizing | 0.992 | D | 0.515 | neutral | D | 0.52448447 | None | None | N |
G/T | 0.2714 | likely_benign | 0.1832 | benign | -0.576 | Destabilizing | 0.998 | D | 0.639 | neutral | None | None | None | None | N |
G/V | 0.3893 | ambiguous | 0.2667 | benign | -0.41 | Destabilizing | 1.0 | D | 0.669 | neutral | D | 0.717100599 | None | None | N |
G/W | 0.54 | ambiguous | 0.4264 | ambiguous | -1.183 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
G/Y | 0.5298 | ambiguous | 0.3897 | ambiguous | -0.86 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.