Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4837 | 14734;14735;14736 | chr2:178735937;178735936;178735935 | chr2:179600664;179600663;179600662 |
N2AB | 4520 | 13783;13784;13785 | chr2:178735937;178735936;178735935 | chr2:179600664;179600663;179600662 |
N2A | 3593 | 11002;11003;11004 | chr2:178735937;178735936;178735935 | chr2:179600664;179600663;179600662 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/H | rs1291141509 | 0.125 | 0.928 | N | 0.346 | 0.335 | 0.564429724435 | gnomAD-2.1.1 | 8.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.77E-05 | 0 |
P/H | rs1291141509 | 0.125 | 0.928 | N | 0.346 | 0.335 | 0.564429724435 | gnomAD-4.0.0 | 1.36837E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79889E-06 | 0 | 0 |
P/L | None | None | 0.001 | N | 0.254 | 0.288 | 0.558499945537 | gnomAD-4.0.0 | 3.42094E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49724E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0711 | likely_benign | 0.0641 | benign | -0.326 | Destabilizing | 0.09 | N | 0.294 | neutral | N | 0.482006266 | None | None | I |
P/C | 0.3841 | ambiguous | 0.3115 | benign | -0.786 | Destabilizing | 0.944 | D | 0.363 | neutral | None | None | None | None | I |
P/D | 0.3236 | likely_benign | 0.2503 | benign | -0.165 | Destabilizing | 0.002 | N | 0.193 | neutral | None | None | None | None | I |
P/E | 0.2254 | likely_benign | 0.1821 | benign | -0.262 | Destabilizing | 0.241 | N | 0.267 | neutral | None | None | None | None | I |
P/F | 0.3131 | likely_benign | 0.2494 | benign | -0.606 | Destabilizing | 0.69 | D | 0.371 | neutral | None | None | None | None | I |
P/G | 0.2368 | likely_benign | 0.1929 | benign | -0.406 | Destabilizing | 0.116 | N | 0.305 | neutral | None | None | None | None | I |
P/H | 0.1453 | likely_benign | 0.1174 | benign | 0.06 | Stabilizing | 0.928 | D | 0.346 | neutral | N | 0.508801056 | None | None | I |
P/I | 0.2043 | likely_benign | 0.1754 | benign | -0.251 | Destabilizing | 0.241 | N | 0.399 | neutral | None | None | None | None | I |
P/K | 0.2094 | likely_benign | 0.1738 | benign | -0.348 | Destabilizing | 0.241 | N | 0.275 | neutral | None | None | None | None | I |
P/L | 0.0965 | likely_benign | 0.084 | benign | -0.251 | Destabilizing | 0.001 | N | 0.254 | neutral | N | 0.49645134 | None | None | I |
P/M | 0.2559 | likely_benign | 0.2169 | benign | -0.585 | Destabilizing | 0.69 | D | 0.343 | neutral | None | None | None | None | I |
P/N | 0.2284 | likely_benign | 0.1806 | benign | -0.185 | Destabilizing | 0.241 | N | 0.385 | neutral | None | None | None | None | I |
P/Q | 0.1308 | likely_benign | 0.1101 | benign | -0.348 | Destabilizing | 0.69 | D | 0.315 | neutral | None | None | None | None | I |
P/R | 0.1406 | likely_benign | 0.1167 | benign | 0.052 | Stabilizing | 0.627 | D | 0.381 | neutral | N | 0.487029605 | None | None | I |
P/S | 0.0924 | likely_benign | 0.0792 | benign | -0.528 | Destabilizing | 0.001 | N | 0.152 | neutral | N | 0.426534581 | None | None | I |
P/T | 0.0858 | likely_benign | 0.0737 | benign | -0.527 | Destabilizing | 0.193 | N | 0.269 | neutral | N | 0.484932479 | None | None | I |
P/V | 0.1495 | likely_benign | 0.1289 | benign | -0.248 | Destabilizing | 0.241 | N | 0.337 | neutral | None | None | None | None | I |
P/W | 0.4943 | ambiguous | 0.4062 | ambiguous | -0.673 | Destabilizing | 0.981 | D | 0.451 | neutral | None | None | None | None | I |
P/Y | 0.2936 | likely_benign | 0.2407 | benign | -0.401 | Destabilizing | 0.818 | D | 0.364 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.