Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4838 | 14737;14738;14739 | chr2:178735934;178735933;178735932 | chr2:179600661;179600660;179600659 |
N2AB | 4521 | 13786;13787;13788 | chr2:178735934;178735933;178735932 | chr2:179600661;179600660;179600659 |
N2A | 3594 | 11005;11006;11007 | chr2:178735934;178735933;178735932 | chr2:179600661;179600660;179600659 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs758347900 | 0.017 | 0.002 | D | 0.205 | 0.198 | 0.366277470483 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
S/L | rs758347900 | 0.017 | 0.002 | D | 0.205 | 0.198 | 0.366277470483 | gnomAD-4.0.0 | 4.77339E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57412E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0976 | likely_benign | 0.0886 | benign | -0.329 | Destabilizing | 0.047 | N | 0.211 | neutral | N | 0.442927287 | None | None | I |
S/C | 0.134 | likely_benign | 0.1185 | benign | -0.269 | Destabilizing | 0.983 | D | 0.264 | neutral | None | None | None | None | I |
S/D | 0.4165 | ambiguous | 0.3418 | ambiguous | 0.405 | Stabilizing | 0.002 | N | 0.143 | neutral | None | None | None | None | I |
S/E | 0.5451 | ambiguous | 0.4867 | ambiguous | 0.347 | Stabilizing | 0.004 | N | 0.105 | neutral | None | None | None | None | I |
S/F | 0.1851 | likely_benign | 0.1595 | benign | -0.805 | Destabilizing | 0.557 | D | 0.263 | neutral | None | None | None | None | I |
S/G | 0.1001 | likely_benign | 0.0829 | benign | -0.482 | Destabilizing | 0.001 | N | 0.114 | neutral | None | None | None | None | I |
S/H | 0.3252 | likely_benign | 0.2913 | benign | -0.888 | Destabilizing | 0.94 | D | 0.26 | neutral | None | None | None | None | I |
S/I | 0.1994 | likely_benign | 0.1658 | benign | -0.051 | Destabilizing | 0.264 | N | 0.307 | neutral | None | None | None | None | I |
S/K | 0.6548 | likely_pathogenic | 0.5841 | pathogenic | -0.397 | Destabilizing | 0.418 | N | 0.223 | neutral | None | None | None | None | I |
S/L | 0.0976 | likely_benign | 0.0871 | benign | -0.051 | Destabilizing | 0.002 | N | 0.205 | neutral | D | 0.549196767 | None | None | I |
S/M | 0.2515 | likely_benign | 0.2258 | benign | -0.081 | Destabilizing | 0.716 | D | 0.261 | neutral | None | None | None | None | I |
S/N | 0.1993 | likely_benign | 0.1533 | benign | -0.182 | Destabilizing | 0.418 | N | 0.244 | neutral | None | None | None | None | I |
S/P | 0.4497 | ambiguous | 0.3637 | ambiguous | -0.112 | Destabilizing | 0.523 | D | 0.309 | neutral | N | 0.517809986 | None | None | I |
S/Q | 0.5141 | ambiguous | 0.4692 | ambiguous | -0.311 | Destabilizing | 0.418 | N | 0.229 | neutral | None | None | None | None | I |
S/R | 0.6008 | likely_pathogenic | 0.5171 | ambiguous | -0.266 | Destabilizing | 0.418 | N | 0.311 | neutral | None | None | None | None | I |
S/T | 0.102 | likely_benign | 0.0918 | benign | -0.249 | Destabilizing | 0.007 | N | 0.16 | neutral | N | 0.461139953 | None | None | I |
S/V | 0.2024 | likely_benign | 0.1701 | benign | -0.112 | Destabilizing | 0.264 | N | 0.288 | neutral | None | None | None | None | I |
S/W | 0.3592 | ambiguous | 0.3271 | benign | -0.869 | Destabilizing | 0.983 | D | 0.266 | neutral | None | None | None | None | I |
S/Y | 0.1831 | likely_benign | 0.1672 | benign | -0.563 | Destabilizing | 0.836 | D | 0.26 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.