Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4851 | 14776;14777;14778 | chr2:178735895;178735894;178735893 | chr2:179600622;179600621;179600620 |
N2AB | 4534 | 13825;13826;13827 | chr2:178735895;178735894;178735893 | chr2:179600622;179600621;179600620 |
N2A | 3607 | 11044;11045;11046 | chr2:178735895;178735894;178735893 | chr2:179600622;179600621;179600620 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/S | None | None | None | N | 0.333 | 0.169 | 0.269558022972 | gnomAD-4.0.0 | 1.59117E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02389E-05 |
I/V | rs1286288159 | None | None | N | 0.133 | 0.065 | 0.353761421236 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 2.07125E-04 | 0 |
I/V | rs1286288159 | None | None | N | 0.133 | 0.065 | 0.353761421236 | gnomAD-4.0.0 | 4.05984E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.61483E-06 | 4.69748E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1602 | likely_benign | 0.1447 | benign | -2.738 | Highly Destabilizing | 0.002 | N | 0.414 | neutral | None | None | None | None | N |
I/C | 0.3264 | likely_benign | 0.2903 | benign | -2.024 | Highly Destabilizing | 0.245 | N | 0.547 | neutral | None | None | None | None | N |
I/D | 0.4771 | ambiguous | 0.3749 | ambiguous | -3.339 | Highly Destabilizing | 0.009 | N | 0.503 | neutral | None | None | None | None | N |
I/E | 0.4153 | ambiguous | 0.3422 | ambiguous | -3.118 | Highly Destabilizing | 0.009 | N | 0.489 | neutral | None | None | None | None | N |
I/F | 0.1145 | likely_benign | 0.1004 | benign | -1.611 | Destabilizing | None | N | 0.24 | neutral | D | 0.582442759 | None | None | N |
I/G | 0.2877 | likely_benign | 0.2508 | benign | -3.26 | Highly Destabilizing | None | N | 0.482 | neutral | None | None | None | None | N |
I/H | 0.2516 | likely_benign | 0.2014 | benign | -2.776 | Highly Destabilizing | 0.245 | N | 0.581 | neutral | None | None | None | None | N |
I/K | 0.3065 | likely_benign | 0.2387 | benign | -2.115 | Highly Destabilizing | 0.009 | N | 0.495 | neutral | None | None | None | None | N |
I/L | 0.1 | likely_benign | 0.0899 | benign | -1.213 | Destabilizing | 0.001 | N | 0.394 | neutral | D | 0.558110647 | None | None | N |
I/M | 0.0932 | likely_benign | 0.0907 | benign | -1.207 | Destabilizing | 0.108 | N | 0.484 | neutral | D | 0.638604987 | None | None | N |
I/N | 0.1348 | likely_benign | 0.1135 | benign | -2.485 | Highly Destabilizing | 0.017 | N | 0.528 | neutral | D | 0.535674002 | None | None | N |
I/P | 0.8833 | likely_pathogenic | 0.8181 | pathogenic | -1.706 | Destabilizing | 0.044 | N | 0.575 | neutral | None | None | None | None | N |
I/Q | 0.2784 | likely_benign | 0.2282 | benign | -2.344 | Highly Destabilizing | 0.044 | N | 0.615 | neutral | None | None | None | None | N |
I/R | 0.2113 | likely_benign | 0.162 | benign | -1.803 | Destabilizing | 0.044 | N | 0.589 | neutral | None | None | None | None | N |
I/S | 0.0889 | likely_benign | 0.082 | benign | -3.1 | Highly Destabilizing | None | N | 0.333 | neutral | N | 0.390364188 | None | None | N |
I/T | 0.1004 | likely_benign | 0.0971 | benign | -2.748 | Highly Destabilizing | None | N | 0.284 | neutral | N | 0.483973515 | None | None | N |
I/V | 0.0684 | likely_benign | 0.0683 | benign | -1.706 | Destabilizing | None | N | 0.133 | neutral | N | 0.505965516 | None | None | N |
I/W | 0.5925 | likely_pathogenic | 0.5081 | ambiguous | -2.086 | Highly Destabilizing | 0.788 | D | 0.602 | neutral | None | None | None | None | N |
I/Y | 0.2704 | likely_benign | 0.2269 | benign | -1.85 | Destabilizing | 0.022 | N | 0.545 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.