Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4853 | 14782;14783;14784 | chr2:178735889;178735888;178735887 | chr2:179600616;179600615;179600614 |
N2AB | 4536 | 13831;13832;13833 | chr2:178735889;178735888;178735887 | chr2:179600616;179600615;179600614 |
N2A | 3609 | 11050;11051;11052 | chr2:178735889;178735888;178735887 | chr2:179600616;179600615;179600614 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs1264041107 | -1.189 | 0.4 | N | 0.469 | 0.212 | 0.323886383625 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/A | rs1264041107 | -1.189 | 0.4 | N | 0.469 | 0.212 | 0.323886383625 | gnomAD-4.0.0 | 6.57099E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46998E-05 | 0 | 0 |
E/Q | None | None | 0.997 | N | 0.585 | 0.27 | 0.356690202451 | gnomAD-4.0.0 | 1.59118E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2684 | likely_benign | 0.1964 | benign | -0.859 | Destabilizing | 0.4 | N | 0.469 | neutral | N | 0.510854535 | None | None | N |
E/C | 0.8839 | likely_pathogenic | 0.8285 | pathogenic | -0.507 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
E/D | 0.3795 | ambiguous | 0.2731 | benign | -1.348 | Destabilizing | 0.99 | D | 0.584 | neutral | N | 0.511392063 | None | None | N |
E/F | 0.7582 | likely_pathogenic | 0.6707 | pathogenic | -0.325 | Destabilizing | 0.996 | D | 0.701 | prob.neutral | None | None | None | None | N |
E/G | 0.3953 | ambiguous | 0.2899 | benign | -1.267 | Destabilizing | 0.98 | D | 0.561 | neutral | D | 0.618775221 | None | None | N |
E/H | 0.5005 | ambiguous | 0.397 | ambiguous | -0.695 | Destabilizing | 0.323 | N | 0.475 | neutral | None | None | None | None | N |
E/I | 0.4221 | ambiguous | 0.3227 | benign | 0.268 | Stabilizing | 0.991 | D | 0.653 | neutral | None | None | None | None | N |
E/K | 0.3448 | ambiguous | 0.2549 | benign | -0.755 | Destabilizing | 0.99 | D | 0.578 | neutral | N | 0.495912429 | None | None | N |
E/L | 0.482 | ambiguous | 0.3612 | ambiguous | 0.268 | Stabilizing | 0.171 | N | 0.574 | neutral | None | None | None | None | N |
E/M | 0.5452 | ambiguous | 0.4365 | ambiguous | 0.774 | Stabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | N |
E/N | 0.5537 | ambiguous | 0.3994 | ambiguous | -1.229 | Destabilizing | 0.996 | D | 0.573 | neutral | None | None | None | None | N |
E/P | 0.9792 | likely_pathogenic | 0.9628 | pathogenic | -0.086 | Destabilizing | 0.998 | D | 0.613 | neutral | None | None | None | None | N |
E/Q | 0.1564 | likely_benign | 0.121 | benign | -1.051 | Destabilizing | 0.997 | D | 0.585 | neutral | N | 0.504414832 | None | None | N |
E/R | 0.4625 | ambiguous | 0.3548 | ambiguous | -0.562 | Destabilizing | 0.996 | D | 0.575 | neutral | None | None | None | None | N |
E/S | 0.3576 | ambiguous | 0.2619 | benign | -1.63 | Destabilizing | 0.971 | D | 0.567 | neutral | None | None | None | None | N |
E/T | 0.3449 | ambiguous | 0.2535 | benign | -1.28 | Destabilizing | 0.985 | D | 0.537 | neutral | None | None | None | None | N |
E/V | 0.2586 | likely_benign | 0.1967 | benign | -0.086 | Destabilizing | 0.961 | D | 0.561 | neutral | N | 0.457223387 | None | None | N |
E/W | 0.9096 | likely_pathogenic | 0.8596 | pathogenic | -0.143 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/Y | 0.6576 | likely_pathogenic | 0.5465 | ambiguous | -0.07 | Destabilizing | 0.996 | D | 0.643 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.