Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4855 | 14788;14789;14790 | chr2:178735883;178735882;178735881 | chr2:179600610;179600609;179600608 |
N2AB | 4538 | 13837;13838;13839 | chr2:178735883;178735882;178735881 | chr2:179600610;179600609;179600608 |
N2A | 3611 | 11056;11057;11058 | chr2:178735883;178735882;178735881 | chr2:179600610;179600609;179600608 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | None | None | 0.001 | N | 0.209 | 0.168 | 0.460526725402 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62502E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0841 | likely_benign | 0.0755 | benign | -0.665 | Destabilizing | 0.047 | N | 0.209 | neutral | N | 0.505380109 | None | None | I |
S/C | 0.1261 | likely_benign | 0.1081 | benign | -0.408 | Destabilizing | 0.983 | D | 0.394 | neutral | None | None | None | None | I |
S/D | 0.3592 | ambiguous | 0.2858 | benign | -0.154 | Destabilizing | 0.593 | D | 0.241 | neutral | None | None | None | None | I |
S/E | 0.3797 | ambiguous | 0.3193 | benign | -0.221 | Destabilizing | 0.418 | N | 0.248 | neutral | None | None | None | None | I |
S/F | 0.1735 | likely_benign | 0.1301 | benign | -1.138 | Destabilizing | 0.557 | D | 0.477 | neutral | None | None | None | None | I |
S/G | 0.1212 | likely_benign | 0.1036 | benign | -0.823 | Destabilizing | 0.001 | N | 0.068 | neutral | None | None | None | None | I |
S/H | 0.254 | likely_benign | 0.2055 | benign | -1.383 | Destabilizing | 0.94 | D | 0.407 | neutral | None | None | None | None | I |
S/I | 0.1803 | likely_benign | 0.141 | benign | -0.363 | Destabilizing | 0.264 | N | 0.456 | neutral | None | None | None | None | I |
S/K | 0.4728 | ambiguous | 0.3782 | ambiguous | -0.609 | Destabilizing | 0.004 | N | 0.077 | neutral | None | None | None | None | I |
S/L | 0.0908 | likely_benign | 0.0778 | benign | -0.363 | Destabilizing | 0.001 | N | 0.209 | neutral | N | 0.40060698 | None | None | I |
S/M | 0.2193 | likely_benign | 0.1834 | benign | 0.068 | Stabilizing | 0.716 | D | 0.427 | neutral | None | None | None | None | I |
S/N | 0.1525 | likely_benign | 0.12 | benign | -0.394 | Destabilizing | 0.593 | D | 0.266 | neutral | None | None | None | None | I |
S/P | 0.2176 | likely_benign | 0.205 | benign | -0.434 | Destabilizing | 0.921 | D | 0.439 | neutral | N | 0.494493532 | None | None | I |
S/Q | 0.3606 | ambiguous | 0.3071 | benign | -0.693 | Destabilizing | 0.716 | D | 0.353 | neutral | None | None | None | None | I |
S/R | 0.3944 | ambiguous | 0.3104 | benign | -0.399 | Destabilizing | 0.264 | N | 0.429 | neutral | None | None | None | None | I |
S/T | 0.0925 | likely_benign | 0.0809 | benign | -0.497 | Destabilizing | 0.183 | N | 0.292 | neutral | N | 0.459741873 | None | None | I |
S/V | 0.1879 | likely_benign | 0.1508 | benign | -0.434 | Destabilizing | 0.002 | N | 0.26 | neutral | None | None | None | None | I |
S/W | 0.2235 | likely_benign | 0.1883 | benign | -1.071 | Destabilizing | 0.983 | D | 0.499 | neutral | None | None | None | None | I |
S/Y | 0.1475 | likely_benign | 0.1154 | benign | -0.817 | Destabilizing | 0.836 | D | 0.473 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.