Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC485714794;14795;14796 chr2:178735877;178735876;178735875chr2:179600604;179600603;179600602
N2AB454013843;13844;13845 chr2:178735877;178735876;178735875chr2:179600604;179600603;179600602
N2A361311062;11063;11064 chr2:178735877;178735876;178735875chr2:179600604;179600603;179600602
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Ig-31
  • Domain position: 63
  • Structural Position: 144
  • Q(SASA): 0.074
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F None None 0.999 N 0.782 0.368 0.707450365078 gnomAD-4.0.0 2.05257E-06 None None None None N None 0 0 None 0 0 None 0 0 2.69833E-06 0 0
L/I None None 0.992 N 0.562 0.269 0.555908562551 gnomAD-4.0.0 1.36838E-06 None None None None N None 0 0 None 0 0 None 0 0 1.79889E-06 0 0
L/R rs1267218460 -1.496 1.0 N 0.782 0.744 0.858254026184 gnomAD-2.1.1 4.02E-06 None None None None N None 0 0 None 0 0 None 0 None 0 8.87E-06 0
L/R rs1267218460 -1.496 1.0 N 0.782 0.744 0.858254026184 gnomAD-4.0.0 3.18227E-06 None None None None N None 0 0 None 0 0 None 0 2.41313E-04 2.85794E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.5653 likely_pathogenic 0.4495 ambiguous -2.21 Highly Destabilizing 0.997 D 0.617 neutral None None None None N
L/C 0.6763 likely_pathogenic 0.603 pathogenic -2.017 Highly Destabilizing 1.0 D 0.735 prob.delet. None None None None N
L/D 0.9774 likely_pathogenic 0.9669 pathogenic -2.05 Highly Destabilizing 1.0 D 0.785 deleterious None None None None N
L/E 0.902 likely_pathogenic 0.8623 pathogenic -1.97 Destabilizing 1.0 D 0.773 deleterious None None None None N
L/F 0.5299 ambiguous 0.427 ambiguous -1.642 Destabilizing 0.999 D 0.782 deleterious N 0.512938934 None None N
L/G 0.8655 likely_pathogenic 0.8079 pathogenic -2.596 Highly Destabilizing 1.0 D 0.77 deleterious None None None None N
L/H 0.8173 likely_pathogenic 0.7528 pathogenic -1.78 Destabilizing 1.0 D 0.739 prob.delet. D 0.613288247 None None N
L/I 0.1159 likely_benign 0.094 benign -1.167 Destabilizing 0.992 D 0.562 neutral N 0.457026083 None None N
L/K 0.8767 likely_pathogenic 0.8469 pathogenic -1.53 Destabilizing 1.0 D 0.766 deleterious None None None None N
L/M 0.2062 likely_benign 0.1721 benign -1.209 Destabilizing 1.0 D 0.765 deleterious None None None None N
L/N 0.8201 likely_pathogenic 0.7722 pathogenic -1.572 Destabilizing 1.0 D 0.781 deleterious None None None None N
L/P 0.7567 likely_pathogenic 0.7252 pathogenic -1.49 Destabilizing 1.0 D 0.777 deleterious N 0.510788487 None None N
L/Q 0.6979 likely_pathogenic 0.6243 pathogenic -1.707 Destabilizing 1.0 D 0.777 deleterious None None None None N
L/R 0.787 likely_pathogenic 0.7376 pathogenic -1.029 Destabilizing 1.0 D 0.782 deleterious N 0.513961416 None None N
L/S 0.7441 likely_pathogenic 0.6272 pathogenic -2.307 Highly Destabilizing 1.0 D 0.771 deleterious None None None None N
L/T 0.4724 ambiguous 0.3685 ambiguous -2.1 Highly Destabilizing 0.999 D 0.741 deleterious None None None None N
L/V 0.1205 likely_benign 0.094 benign -1.49 Destabilizing 0.767 D 0.395 neutral N 0.37668368 None None N
L/W 0.8519 likely_pathogenic 0.7968 pathogenic -1.732 Destabilizing 1.0 D 0.681 prob.neutral None None None None N
L/Y 0.874 likely_pathogenic 0.8257 pathogenic -1.484 Destabilizing 1.0 D 0.793 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.