Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4866 | 14821;14822;14823 | chr2:178735850;178735849;178735848 | chr2:179600577;179600576;179600575 |
N2AB | 4549 | 13870;13871;13872 | chr2:178735850;178735849;178735848 | chr2:179600577;179600576;179600575 |
N2A | 3622 | 11089;11090;11091 | chr2:178735850;178735849;178735848 | chr2:179600577;179600576;179600575 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs1226951123 | -0.701 | 0.642 | N | 0.729 | 0.272 | 0.532020707701 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
S/F | rs1226951123 | -0.701 | 0.642 | N | 0.729 | 0.272 | 0.532020707701 | gnomAD-4.0.0 | 3.18256E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71608E-06 | 0 | 0 |
S/Y | None | None | 0.975 | N | 0.727 | 0.307 | 0.548779645056 | gnomAD-4.0.0 | 1.59128E-06 | None | None | None | None | N | None | 0 | 2.28686E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1109 | likely_benign | 0.0957 | benign | -0.897 | Destabilizing | 0.001 | N | 0.143 | neutral | N | 0.505837832 | None | None | N |
S/C | 0.1354 | likely_benign | 0.1157 | benign | -0.718 | Destabilizing | 0.975 | D | 0.669 | neutral | N | 0.509506755 | None | None | N |
S/D | 0.7629 | likely_pathogenic | 0.6894 | pathogenic | -1.711 | Destabilizing | 0.704 | D | 0.569 | neutral | None | None | None | None | N |
S/E | 0.7612 | likely_pathogenic | 0.7156 | pathogenic | -1.494 | Destabilizing | 0.704 | D | 0.495 | neutral | None | None | None | None | N |
S/F | 0.2309 | likely_benign | 0.1855 | benign | -0.683 | Destabilizing | 0.642 | D | 0.729 | prob.delet. | N | 0.516122503 | None | None | N |
S/G | 0.1879 | likely_benign | 0.1419 | benign | -1.293 | Destabilizing | 0.329 | N | 0.455 | neutral | None | None | None | None | N |
S/H | 0.469 | ambiguous | 0.4085 | ambiguous | -1.59 | Destabilizing | 0.981 | D | 0.665 | neutral | None | None | None | None | N |
S/I | 0.2002 | likely_benign | 0.1628 | benign | 0.116 | Stabilizing | 0.329 | N | 0.677 | prob.neutral | None | None | None | None | N |
S/K | 0.8685 | likely_pathogenic | 0.8196 | pathogenic | -0.216 | Destabilizing | 0.495 | N | 0.481 | neutral | None | None | None | None | N |
S/L | 0.1237 | likely_benign | 0.1018 | benign | 0.116 | Stabilizing | 0.001 | N | 0.485 | neutral | None | None | None | None | N |
S/M | 0.3065 | likely_benign | 0.2497 | benign | -0.07 | Destabilizing | 0.893 | D | 0.676 | prob.neutral | None | None | None | None | N |
S/N | 0.3047 | likely_benign | 0.2238 | benign | -1.008 | Destabilizing | 0.704 | D | 0.551 | neutral | None | None | None | None | N |
S/P | 0.9689 | likely_pathogenic | 0.9548 | pathogenic | -0.188 | Destabilizing | 0.784 | D | 0.69 | prob.neutral | D | 0.650645063 | None | None | N |
S/Q | 0.6638 | likely_pathogenic | 0.6137 | pathogenic | -0.714 | Destabilizing | 0.828 | D | 0.611 | neutral | None | None | None | None | N |
S/R | 0.7279 | likely_pathogenic | 0.6649 | pathogenic | -0.658 | Destabilizing | 0.704 | D | 0.695 | prob.neutral | None | None | None | None | N |
S/T | 0.0934 | likely_benign | 0.0803 | benign | -0.62 | Destabilizing | 0.01 | N | 0.224 | neutral | N | 0.342185129 | None | None | N |
S/V | 0.2345 | likely_benign | 0.1903 | benign | -0.188 | Destabilizing | 0.013 | N | 0.524 | neutral | None | None | None | None | N |
S/W | 0.406 | ambiguous | 0.3726 | ambiguous | -0.998 | Destabilizing | 0.995 | D | 0.721 | prob.delet. | None | None | None | None | N |
S/Y | 0.2125 | likely_benign | 0.1858 | benign | -0.53 | Destabilizing | 0.975 | D | 0.727 | prob.delet. | N | 0.504349562 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.