Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4868 | 14827;14828;14829 | chr2:178735844;178735843;178735842 | chr2:179600571;179600570;179600569 |
N2AB | 4551 | 13876;13877;13878 | chr2:178735844;178735843;178735842 | chr2:179600571;179600570;179600569 |
N2A | 3624 | 11095;11096;11097 | chr2:178735844;178735843;178735842 | chr2:179600571;179600570;179600569 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1276077770 | -0.392 | 0.939 | N | 0.587 | 0.366 | 0.39724302092 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/E | rs1276077770 | -0.392 | 0.939 | N | 0.587 | 0.366 | 0.39724302092 | gnomAD-4.0.0 | 1.5913E-06 | None | None | None | None | I | None | 0 | 2.28686E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/R | None | None | 0.1 | N | 0.383 | 0.118 | 0.245101548738 | gnomAD-4.0.0 | 2.40067E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62503E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7596 | likely_pathogenic | 0.6906 | pathogenic | -0.676 | Destabilizing | 0.953 | D | 0.648 | neutral | None | None | None | None | I |
K/C | 0.903 | likely_pathogenic | 0.869 | pathogenic | -0.811 | Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | I |
K/D | 0.9609 | likely_pathogenic | 0.9357 | pathogenic | -0.095 | Destabilizing | 0.993 | D | 0.762 | deleterious | None | None | None | None | I |
K/E | 0.4836 | ambiguous | 0.3968 | ambiguous | 0.01 | Stabilizing | 0.939 | D | 0.587 | neutral | N | 0.435242831 | None | None | I |
K/F | 0.9311 | likely_pathogenic | 0.9069 | pathogenic | -0.459 | Destabilizing | 0.986 | D | 0.782 | deleterious | None | None | None | None | I |
K/G | 0.9038 | likely_pathogenic | 0.8584 | pathogenic | -1.028 | Destabilizing | 0.993 | D | 0.76 | deleterious | None | None | None | None | I |
K/H | 0.6035 | likely_pathogenic | 0.5329 | ambiguous | -1.347 | Destabilizing | 0.999 | D | 0.73 | prob.delet. | None | None | None | None | I |
K/I | 0.5525 | ambiguous | 0.5068 | ambiguous | 0.227 | Stabilizing | 0.973 | D | 0.785 | deleterious | None | None | None | None | I |
K/L | 0.6071 | likely_pathogenic | 0.5604 | ambiguous | 0.227 | Stabilizing | 0.778 | D | 0.691 | prob.neutral | None | None | None | None | I |
K/M | 0.3915 | ambiguous | 0.3622 | ambiguous | 0.132 | Stabilizing | 0.76 | D | 0.559 | neutral | N | 0.403262519 | None | None | I |
K/N | 0.868 | likely_pathogenic | 0.8205 | pathogenic | -0.459 | Destabilizing | 0.991 | D | 0.656 | neutral | N | 0.480294365 | None | None | I |
K/P | 0.9916 | likely_pathogenic | 0.9878 | pathogenic | -0.044 | Destabilizing | 0.998 | D | 0.766 | deleterious | None | None | None | None | I |
K/Q | 0.2766 | likely_benign | 0.2281 | benign | -0.596 | Destabilizing | 0.982 | D | 0.675 | neutral | N | 0.459468622 | None | None | I |
K/R | 0.1203 | likely_benign | 0.1037 | benign | -0.539 | Destabilizing | 0.1 | N | 0.383 | neutral | N | 0.423968671 | None | None | I |
K/S | 0.8155 | likely_pathogenic | 0.7497 | pathogenic | -1.199 | Destabilizing | 0.953 | D | 0.613 | neutral | None | None | None | None | I |
K/T | 0.4287 | ambiguous | 0.3496 | ambiguous | -0.886 | Destabilizing | 0.982 | D | 0.732 | prob.delet. | N | 0.350698899 | None | None | I |
K/V | 0.5317 | ambiguous | 0.4756 | ambiguous | -0.044 | Destabilizing | 0.91 | D | 0.74 | deleterious | None | None | None | None | I |
K/W | 0.9349 | likely_pathogenic | 0.9138 | pathogenic | -0.279 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | I |
K/Y | 0.8587 | likely_pathogenic | 0.8268 | pathogenic | 0.033 | Stabilizing | 0.993 | D | 0.791 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.