Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4881 | 14866;14867;14868 | chr2:178735805;178735804;178735803 | chr2:179600532;179600531;179600530 |
N2AB | 4564 | 13915;13916;13917 | chr2:178735805;178735804;178735803 | chr2:179600532;179600531;179600530 |
N2A | 3637 | 11134;11135;11136 | chr2:178735805;178735804;178735803 | chr2:179600532;179600531;179600530 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs781644443 | -0.728 | 0.996 | N | 0.45 | 0.332 | 0.459370960843 | gnomAD-2.1.1 | 1.07E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.35E-05 | 0 |
E/D | rs781644443 | -0.728 | 0.996 | N | 0.45 | 0.332 | 0.459370960843 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 5.88E-05 | 0 | 0 |
E/D | rs781644443 | -0.728 | 0.996 | N | 0.45 | 0.332 | 0.459370960843 | gnomAD-4.0.0 | 2.29299E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.13617E-05 | 0 | 0 |
E/G | None | None | 0.999 | N | 0.767 | 0.657 | 0.623711697247 | gnomAD-4.0.0 | 1.59152E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85824E-06 | 0 | 0 |
E/Q | rs756371735 | -0.297 | 0.957 | N | 0.259 | 0.305 | 0.363751660372 | gnomAD-4.0.0 | 3.60099E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.93753E-06 | 0 | 0 |
E/V | rs2081343515 | None | 0.999 | N | 0.817 | 0.634 | 0.678242657409 | gnomAD-4.0.0 | 3.18303E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71647E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2272 | likely_benign | 0.1949 | benign | -0.969 | Destabilizing | 0.996 | D | 0.643 | neutral | N | 0.517017552 | None | None | I |
E/C | 0.9219 | likely_pathogenic | 0.8794 | pathogenic | -0.426 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | I |
E/D | 0.1818 | likely_benign | 0.1487 | benign | -0.974 | Destabilizing | 0.996 | D | 0.45 | neutral | N | 0.506888645 | None | None | I |
E/F | 0.8488 | likely_pathogenic | 0.7714 | pathogenic | -0.256 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | I |
E/G | 0.2617 | likely_benign | 0.2182 | benign | -1.349 | Destabilizing | 0.999 | D | 0.767 | deleterious | N | 0.515731111 | None | None | I |
E/H | 0.5114 | ambiguous | 0.4114 | ambiguous | -0.411 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | I |
E/I | 0.5781 | likely_pathogenic | 0.4621 | ambiguous | 0.079 | Stabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
E/K | 0.1633 | likely_benign | 0.1348 | benign | -0.323 | Destabilizing | 0.992 | D | 0.528 | neutral | N | 0.487130749 | None | None | I |
E/L | 0.5922 | likely_pathogenic | 0.4849 | ambiguous | 0.079 | Stabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
E/M | 0.6273 | likely_pathogenic | 0.5252 | ambiguous | 0.521 | Stabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
E/N | 0.3049 | likely_benign | 0.2397 | benign | -0.949 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
E/P | 0.7238 | likely_pathogenic | 0.6681 | pathogenic | -0.249 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | I |
E/Q | 0.1643 | likely_benign | 0.1324 | benign | -0.813 | Destabilizing | 0.957 | D | 0.259 | neutral | N | 0.455440755 | None | None | I |
E/R | 0.2907 | likely_benign | 0.2471 | benign | -0.045 | Destabilizing | 0.999 | D | 0.698 | prob.neutral | None | None | None | None | I |
E/S | 0.2493 | likely_benign | 0.2053 | benign | -1.29 | Destabilizing | 0.997 | D | 0.603 | neutral | None | None | None | None | I |
E/T | 0.3016 | likely_benign | 0.2314 | benign | -0.955 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | I |
E/V | 0.3605 | ambiguous | 0.2815 | benign | -0.249 | Destabilizing | 0.999 | D | 0.817 | deleterious | N | 0.498154653 | None | None | I |
E/W | 0.9354 | likely_pathogenic | 0.8974 | pathogenic | 0.106 | Stabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
E/Y | 0.7226 | likely_pathogenic | 0.6306 | pathogenic | 0.061 | Stabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.