Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4890 | 14893;14894;14895 | chr2:178735778;178735777;178735776 | chr2:179600505;179600504;179600503 |
N2AB | 4573 | 13942;13943;13944 | chr2:178735778;178735777;178735776 | chr2:179600505;179600504;179600503 |
N2A | 3646 | 11161;11162;11163 | chr2:178735778;178735777;178735776 | chr2:179600505;179600504;179600503 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.76 | D | 0.643 | 0.539 | 0.423119698836 | gnomAD-4.0.0 | 6.84262E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99475E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9597 | likely_pathogenic | 0.9444 | pathogenic | -2.876 | Highly Destabilizing | 0.953 | D | 0.793 | deleterious | None | None | None | None | N |
F/C | 0.8383 | likely_pathogenic | 0.7374 | pathogenic | -1.553 | Destabilizing | 0.999 | D | 0.833 | deleterious | D | 0.791512631 | None | None | N |
F/D | 0.9903 | likely_pathogenic | 0.9892 | pathogenic | -2.665 | Highly Destabilizing | 0.998 | D | 0.875 | deleterious | None | None | None | None | N |
F/E | 0.9923 | likely_pathogenic | 0.99 | pathogenic | -2.579 | Highly Destabilizing | 0.998 | D | 0.877 | deleterious | None | None | None | None | N |
F/G | 0.9808 | likely_pathogenic | 0.9738 | pathogenic | -3.208 | Highly Destabilizing | 0.998 | D | 0.861 | deleterious | None | None | None | None | N |
F/H | 0.9439 | likely_pathogenic | 0.9304 | pathogenic | -1.49 | Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
F/I | 0.4984 | ambiguous | 0.3841 | ambiguous | -1.829 | Destabilizing | 0.1 | N | 0.475 | neutral | D | 0.569667167 | None | None | N |
F/K | 0.9882 | likely_pathogenic | 0.9848 | pathogenic | -1.507 | Destabilizing | 0.993 | D | 0.874 | deleterious | None | None | None | None | N |
F/L | 0.9418 | likely_pathogenic | 0.9061 | pathogenic | -1.829 | Destabilizing | 0.76 | D | 0.643 | neutral | D | 0.643652754 | None | None | N |
F/M | 0.8478 | likely_pathogenic | 0.7858 | pathogenic | -1.492 | Destabilizing | 0.986 | D | 0.723 | prob.delet. | None | None | None | None | N |
F/N | 0.9678 | likely_pathogenic | 0.9625 | pathogenic | -1.573 | Destabilizing | 0.998 | D | 0.875 | deleterious | None | None | None | None | N |
F/P | 0.9904 | likely_pathogenic | 0.9877 | pathogenic | -2.18 | Highly Destabilizing | 0.998 | D | 0.877 | deleterious | None | None | None | None | N |
F/Q | 0.9853 | likely_pathogenic | 0.9802 | pathogenic | -1.783 | Destabilizing | 0.999 | D | 0.872 | deleterious | None | None | None | None | N |
F/R | 0.9702 | likely_pathogenic | 0.9611 | pathogenic | -0.72 | Destabilizing | 0.998 | D | 0.881 | deleterious | None | None | None | None | N |
F/S | 0.9504 | likely_pathogenic | 0.9305 | pathogenic | -2.257 | Highly Destabilizing | 0.991 | D | 0.845 | deleterious | D | 0.791101806 | None | None | N |
F/T | 0.9612 | likely_pathogenic | 0.9456 | pathogenic | -2.082 | Highly Destabilizing | 0.986 | D | 0.835 | deleterious | None | None | None | None | N |
F/V | 0.5982 | likely_pathogenic | 0.4732 | ambiguous | -2.18 | Highly Destabilizing | 0.725 | D | 0.697 | prob.neutral | D | 0.634182678 | None | None | N |
F/W | 0.8436 | likely_pathogenic | 0.7976 | pathogenic | -0.739 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
F/Y | 0.4967 | ambiguous | 0.4249 | ambiguous | -1.019 | Destabilizing | 0.99 | D | 0.627 | neutral | D | 0.791165501 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.