Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4892 | 14899;14900;14901 | chr2:178735772;178735771;178735770 | chr2:179600499;179600498;179600497 |
N2AB | 4575 | 13948;13949;13950 | chr2:178735772;178735771;178735770 | chr2:179600499;179600498;179600497 |
N2A | 3648 | 11167;11168;11169 | chr2:178735772;178735771;178735770 | chr2:179600499;179600498;179600497 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1200349655 | 0.125 | 0.999 | N | 0.615 | 0.407 | 0.422524665647 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/E | rs1200349655 | 0.125 | 0.999 | N | 0.615 | 0.407 | 0.422524665647 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/E | rs1200349655 | 0.125 | 0.999 | N | 0.615 | 0.407 | 0.422524665647 | gnomAD-4.0.0 | 1.30139E-05 | None | None | None | None | N | None | 1.33422E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.61043E-05 | 0 | 1.60149E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5897 | likely_pathogenic | 0.5168 | ambiguous | -0.453 | Destabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | N |
K/C | 0.8175 | likely_pathogenic | 0.7687 | pathogenic | -0.442 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
K/D | 0.7998 | likely_pathogenic | 0.7575 | pathogenic | -0.167 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | N |
K/E | 0.2595 | likely_benign | 0.2133 | benign | -0.05 | Destabilizing | 0.999 | D | 0.615 | neutral | N | 0.509764227 | None | None | N |
K/F | 0.9042 | likely_pathogenic | 0.8712 | pathogenic | 0.02 | Stabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
K/G | 0.6536 | likely_pathogenic | 0.6061 | pathogenic | -0.829 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | N |
K/H | 0.4583 | ambiguous | 0.3895 | ambiguous | -1.091 | Destabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | N |
K/I | 0.6134 | likely_pathogenic | 0.5341 | ambiguous | 0.525 | Stabilizing | 1.0 | D | 0.72 | prob.delet. | D | 0.52995995 | None | None | N |
K/L | 0.5526 | ambiguous | 0.4867 | ambiguous | 0.525 | Stabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | N |
K/M | 0.3965 | ambiguous | 0.344 | ambiguous | 0.266 | Stabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | N |
K/N | 0.6605 | likely_pathogenic | 0.5973 | pathogenic | -0.466 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | N | 0.511636613 | None | None | N |
K/P | 0.9259 | likely_pathogenic | 0.9437 | pathogenic | 0.229 | Stabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
K/Q | 0.1969 | likely_benign | 0.1638 | benign | -0.478 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | N | 0.500910637 | None | None | N |
K/R | 0.0911 | likely_benign | 0.0882 | benign | -0.642 | Destabilizing | 0.999 | D | 0.548 | neutral | N | 0.502849283 | None | None | N |
K/S | 0.6326 | likely_pathogenic | 0.5666 | pathogenic | -1.033 | Destabilizing | 0.999 | D | 0.622 | neutral | None | None | None | None | N |
K/T | 0.3128 | likely_benign | 0.2689 | benign | -0.717 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | N | 0.502918738 | None | None | N |
K/V | 0.5625 | ambiguous | 0.4779 | ambiguous | 0.229 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
K/W | 0.8329 | likely_pathogenic | 0.7905 | pathogenic | 0.099 | Stabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | N |
K/Y | 0.7947 | likely_pathogenic | 0.7463 | pathogenic | 0.352 | Stabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.