Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4898 | 14917;14918;14919 | chr2:178735754;178735753;178735752 | chr2:179600481;179600480;179600479 |
N2AB | 4581 | 13966;13967;13968 | chr2:178735754;178735753;178735752 | chr2:179600481;179600480;179600479 |
N2A | 3654 | 11185;11186;11187 | chr2:178735754;178735753;178735752 | chr2:179600481;179600480;179600479 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/L | None | None | 0.425 | N | 0.29 | 0.255 | 0.505028829284 | gnomAD-4.0.0 | 1.59143E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85814E-06 | 0 | 0 |
Q/R | rs763540495 | 0.602 | 0.006 | N | 0.169 | 0.162 | 0.18274738541 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
Q/R | rs763540495 | 0.602 | 0.006 | N | 0.169 | 0.162 | 0.18274738541 | gnomAD-4.0.0 | 1.59143E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43279E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2498 | likely_benign | 0.2179 | benign | -0.151 | Destabilizing | 0.013 | N | 0.147 | neutral | None | None | None | None | I |
Q/C | 0.6534 | likely_pathogenic | 0.5497 | ambiguous | 0.181 | Stabilizing | 0.981 | D | 0.263 | neutral | None | None | None | None | I |
Q/D | 0.4081 | ambiguous | 0.3535 | ambiguous | 0.138 | Stabilizing | 0.495 | N | 0.193 | neutral | None | None | None | None | I |
Q/E | 0.0852 | likely_benign | 0.0815 | benign | 0.098 | Stabilizing | 0.425 | N | 0.199 | neutral | N | 0.48068689 | None | None | I |
Q/F | 0.6292 | likely_pathogenic | 0.5465 | ambiguous | -0.423 | Destabilizing | 0.981 | D | 0.3 | neutral | None | None | None | None | I |
Q/G | 0.3509 | ambiguous | 0.2982 | benign | -0.312 | Destabilizing | 0.495 | N | 0.256 | neutral | None | None | None | None | I |
Q/H | 0.2229 | likely_benign | 0.1729 | benign | -0.254 | Destabilizing | 0.927 | D | 0.288 | neutral | N | 0.477782561 | None | None | I |
Q/I | 0.3292 | likely_benign | 0.2858 | benign | 0.177 | Stabilizing | 0.704 | D | 0.382 | neutral | None | None | None | None | I |
Q/K | 0.1187 | likely_benign | 0.1044 | benign | 0.182 | Stabilizing | 0.01 | N | 0.175 | neutral | N | 0.492110608 | None | None | I |
Q/L | 0.1421 | likely_benign | 0.126 | benign | 0.177 | Stabilizing | 0.425 | N | 0.29 | neutral | N | 0.503085515 | None | None | I |
Q/M | 0.399 | ambiguous | 0.3527 | ambiguous | 0.402 | Stabilizing | 0.981 | D | 0.289 | neutral | None | None | None | None | I |
Q/N | 0.3125 | likely_benign | 0.2742 | benign | -0.127 | Destabilizing | 0.495 | N | 0.195 | neutral | None | None | None | None | I |
Q/P | 0.174 | likely_benign | 0.1587 | benign | 0.095 | Stabilizing | 0.784 | D | 0.322 | neutral | N | 0.512318323 | None | None | I |
Q/R | 0.1232 | likely_benign | 0.1052 | benign | 0.291 | Stabilizing | 0.006 | N | 0.169 | neutral | N | 0.397192716 | None | None | I |
Q/S | 0.2623 | likely_benign | 0.2254 | benign | -0.13 | Destabilizing | 0.037 | N | 0.146 | neutral | None | None | None | None | I |
Q/T | 0.1987 | likely_benign | 0.1694 | benign | -0.018 | Destabilizing | 0.013 | N | 0.161 | neutral | None | None | None | None | I |
Q/V | 0.239 | likely_benign | 0.208 | benign | 0.095 | Stabilizing | 0.495 | N | 0.295 | neutral | None | None | None | None | I |
Q/W | 0.5162 | ambiguous | 0.4052 | ambiguous | -0.415 | Destabilizing | 0.995 | D | 0.264 | neutral | None | None | None | None | I |
Q/Y | 0.4089 | ambiguous | 0.3275 | benign | -0.142 | Destabilizing | 0.981 | D | 0.338 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.