Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4909 | 14950;14951;14952 | chr2:178735721;178735720;178735719 | chr2:179600448;179600447;179600446 |
N2AB | 4592 | 13999;14000;14001 | chr2:178735721;178735720;178735719 | chr2:179600448;179600447;179600446 |
N2A | 3665 | 11218;11219;11220 | chr2:178735721;178735720;178735719 | chr2:179600448;179600447;179600446 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/F | None | None | 0.859 | D | 0.87 | 0.487 | 0.776434072436 | gnomAD-4.0.0 | 6.84226E-07 | None | None | disulfide | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99454E-07 | 0 | 0 |
C/Y | rs188073989 | None | 0.859 | N | 0.88 | 0.532 | 0.663756110175 | gnomAD-4.0.0 | 6.84226E-07 | None | None | disulfide | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99454E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.4496 | ambiguous | 0.4721 | ambiguous | -1.774 | Destabilizing | 0.072 | N | 0.658 | neutral | None | None | disulfide | None | N |
C/D | 0.9789 | likely_pathogenic | 0.9851 | pathogenic | -1.773 | Destabilizing | 0.567 | D | 0.881 | deleterious | None | None | disulfide | None | N |
C/E | 0.9897 | likely_pathogenic | 0.9927 | pathogenic | -1.54 | Destabilizing | 0.726 | D | 0.901 | deleterious | None | None | disulfide | None | N |
C/F | 0.4319 | ambiguous | 0.4702 | ambiguous | -1.042 | Destabilizing | 0.859 | D | 0.87 | deleterious | D | 0.547539872 | disulfide | None | N |
C/G | 0.167 | likely_benign | 0.1831 | benign | -2.121 | Highly Destabilizing | None | N | 0.649 | neutral | N | 0.495890613 | disulfide | None | N |
C/H | 0.96 | likely_pathogenic | 0.9703 | pathogenic | -2.229 | Highly Destabilizing | 0.968 | D | 0.899 | deleterious | None | None | disulfide | None | N |
C/I | 0.5597 | ambiguous | 0.6012 | pathogenic | -0.824 | Destabilizing | 0.726 | D | 0.825 | deleterious | None | None | disulfide | None | N |
C/K | 0.9935 | likely_pathogenic | 0.9951 | pathogenic | -1.489 | Destabilizing | 0.567 | D | 0.887 | deleterious | None | None | disulfide | None | N |
C/L | 0.6053 | likely_pathogenic | 0.6333 | pathogenic | -0.824 | Destabilizing | 0.272 | N | 0.791 | deleterious | None | None | disulfide | None | N |
C/M | 0.7673 | likely_pathogenic | 0.7965 | pathogenic | -0.064 | Destabilizing | 0.968 | D | 0.824 | deleterious | None | None | disulfide | None | N |
C/N | 0.9156 | likely_pathogenic | 0.9353 | pathogenic | -2.062 | Highly Destabilizing | 0.567 | D | 0.887 | deleterious | None | None | disulfide | None | N |
C/P | 0.9925 | likely_pathogenic | 0.9946 | pathogenic | -1.121 | Destabilizing | 0.726 | D | 0.902 | deleterious | None | None | disulfide | None | N |
C/Q | 0.9788 | likely_pathogenic | 0.9833 | pathogenic | -1.602 | Destabilizing | 0.726 | D | 0.905 | deleterious | None | None | disulfide | None | N |
C/R | 0.9621 | likely_pathogenic | 0.9698 | pathogenic | -1.783 | Destabilizing | 0.667 | D | 0.895 | deleterious | D | 0.54859 | disulfide | None | N |
C/S | 0.5008 | ambiguous | 0.54 | ambiguous | -2.382 | Highly Destabilizing | 0.124 | N | 0.785 | deleterious | N | 0.498819336 | disulfide | None | N |
C/T | 0.6456 | likely_pathogenic | 0.6806 | pathogenic | -1.98 | Destabilizing | 0.272 | N | 0.821 | deleterious | None | None | disulfide | None | N |
C/V | 0.4469 | ambiguous | 0.4683 | ambiguous | -1.121 | Destabilizing | 0.431 | N | 0.816 | deleterious | None | None | disulfide | None | N |
C/W | 0.8757 | likely_pathogenic | 0.8979 | pathogenic | -1.459 | Destabilizing | 0.958 | D | 0.883 | deleterious | D | 0.54859 | disulfide | None | N |
C/Y | 0.6643 | likely_pathogenic | 0.7075 | pathogenic | -1.284 | Destabilizing | 0.859 | D | 0.88 | deleterious | N | 0.388467375 | disulfide | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.