Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4918 | 14977;14978;14979 | chr2:178735694;178735693;178735692 | chr2:179600421;179600420;179600419 |
N2AB | 4601 | 14026;14027;14028 | chr2:178735694;178735693;178735692 | chr2:179600421;179600420;179600419 |
N2A | 3674 | 11245;11246;11247 | chr2:178735694;178735693;178735692 | chr2:179600421;179600420;179600419 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs749179515 | 0.044 | 0.97 | D | 0.669 | 0.298 | 0.576674430037 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.66003E-04 |
T/I | rs749179515 | 0.044 | 0.97 | D | 0.669 | 0.298 | 0.576674430037 | gnomAD-4.0.0 | 4.77407E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71615E-06 | 0 | 3.02462E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0781 | likely_benign | 0.0849 | benign | -0.607 | Destabilizing | 0.489 | N | 0.46 | neutral | N | 0.510578358 | None | None | N |
T/C | 0.3993 | ambiguous | 0.4433 | ambiguous | -0.426 | Destabilizing | 0.998 | D | 0.653 | neutral | None | None | None | None | N |
T/D | 0.292 | likely_benign | 0.3435 | ambiguous | 0.449 | Stabilizing | 0.956 | D | 0.616 | neutral | None | None | None | None | N |
T/E | 0.2329 | likely_benign | 0.2776 | benign | 0.406 | Stabilizing | 0.86 | D | 0.6 | neutral | None | None | None | None | N |
T/F | 0.1708 | likely_benign | 0.201 | benign | -1.085 | Destabilizing | 0.978 | D | 0.757 | deleterious | None | None | None | None | N |
T/G | 0.2316 | likely_benign | 0.2731 | benign | -0.76 | Destabilizing | 0.754 | D | 0.601 | neutral | None | None | None | None | N |
T/H | 0.1985 | likely_benign | 0.2258 | benign | -0.995 | Destabilizing | 0.994 | D | 0.739 | prob.delet. | None | None | None | None | N |
T/I | 0.1251 | likely_benign | 0.1425 | benign | -0.315 | Destabilizing | 0.97 | D | 0.669 | neutral | D | 0.532377904 | None | None | N |
T/K | 0.1548 | likely_benign | 0.1751 | benign | -0.308 | Destabilizing | 0.698 | D | 0.572 | neutral | N | 0.496207717 | None | None | N |
T/L | 0.09 | likely_benign | 0.1016 | benign | -0.315 | Destabilizing | 0.86 | D | 0.599 | neutral | None | None | None | None | N |
T/M | 0.0786 | likely_benign | 0.0827 | benign | -0.225 | Destabilizing | 0.998 | D | 0.657 | neutral | None | None | None | None | N |
T/N | 0.1038 | likely_benign | 0.1171 | benign | -0.22 | Destabilizing | 0.86 | D | 0.497 | neutral | None | None | None | None | N |
T/P | 0.2563 | likely_benign | 0.2955 | benign | -0.384 | Destabilizing | 0.97 | D | 0.668 | neutral | D | 0.703298797 | None | None | N |
T/Q | 0.1873 | likely_benign | 0.2099 | benign | -0.35 | Destabilizing | 0.956 | D | 0.674 | neutral | None | None | None | None | N |
T/R | 0.1263 | likely_benign | 0.1429 | benign | -0.116 | Destabilizing | 0.032 | N | 0.28 | neutral | N | 0.512394281 | None | None | N |
T/S | 0.0989 | likely_benign | 0.108 | benign | -0.496 | Destabilizing | 0.058 | N | 0.163 | neutral | N | 0.503636017 | None | None | N |
T/V | 0.1169 | likely_benign | 0.1289 | benign | -0.384 | Destabilizing | 0.86 | D | 0.504 | neutral | None | None | None | None | N |
T/W | 0.4577 | ambiguous | 0.5182 | ambiguous | -1.07 | Destabilizing | 0.998 | D | 0.763 | deleterious | None | None | None | None | N |
T/Y | 0.2299 | likely_benign | 0.2647 | benign | -0.779 | Destabilizing | 0.993 | D | 0.755 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.