Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4925 | 14998;14999;15000 | chr2:178735673;178735672;178735671 | chr2:179600400;179600399;179600398 |
N2AB | 4608 | 14047;14048;14049 | chr2:178735673;178735672;178735671 | chr2:179600400;179600399;179600398 |
N2A | 3681 | 11266;11267;11268 | chr2:178735673;178735672;178735671 | chr2:179600400;179600399;179600398 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | None | None | 1.0 | N | 0.549 | 0.432 | 0.219573609325 | gnomAD-4.0.0 | 1.59138E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85811E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1673 | likely_benign | 0.2345 | benign | -0.212 | Destabilizing | 1.0 | D | 0.549 | neutral | N | 0.476587905 | None | None | N |
G/C | 0.234 | likely_benign | 0.2983 | benign | -0.921 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
G/D | 0.1523 | likely_benign | 0.2114 | benign | -0.529 | Destabilizing | 1.0 | D | 0.579 | neutral | None | None | None | None | N |
G/E | 0.1624 | likely_benign | 0.2296 | benign | -0.694 | Destabilizing | 1.0 | D | 0.637 | neutral | N | 0.47002272 | None | None | N |
G/F | 0.4636 | ambiguous | 0.6135 | pathogenic | -0.991 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | N |
G/H | 0.2452 | likely_benign | 0.329 | benign | -0.346 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
G/I | 0.2929 | likely_benign | 0.4397 | ambiguous | -0.464 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
G/K | 0.2402 | likely_benign | 0.3218 | benign | -0.637 | Destabilizing | 1.0 | D | 0.638 | neutral | None | None | None | None | N |
G/L | 0.3855 | ambiguous | 0.5282 | ambiguous | -0.464 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
G/M | 0.411 | ambiguous | 0.5439 | ambiguous | -0.541 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
G/N | 0.1655 | likely_benign | 0.2133 | benign | -0.353 | Destabilizing | 1.0 | D | 0.626 | neutral | None | None | None | None | N |
G/P | 0.8892 | likely_pathogenic | 0.9532 | pathogenic | -0.353 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
G/Q | 0.1938 | likely_benign | 0.2581 | benign | -0.631 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
G/R | 0.1655 | likely_benign | 0.212 | benign | -0.216 | Destabilizing | 1.0 | D | 0.671 | neutral | N | 0.476941725 | None | None | N |
G/S | 0.0895 | likely_benign | 0.1072 | benign | -0.487 | Destabilizing | 1.0 | D | 0.642 | neutral | None | None | None | None | N |
G/T | 0.1863 | likely_benign | 0.2737 | benign | -0.587 | Destabilizing | 1.0 | D | 0.635 | neutral | None | None | None | None | N |
G/V | 0.2579 | likely_benign | 0.3823 | ambiguous | -0.353 | Destabilizing | 1.0 | D | 0.669 | neutral | D | 0.533271643 | None | None | N |
G/W | 0.337 | likely_benign | 0.4566 | ambiguous | -1.102 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | N | 0.515714052 | None | None | N |
G/Y | 0.3318 | likely_benign | 0.4655 | ambiguous | -0.778 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.