Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4934 | 15025;15026;15027 | chr2:178735646;178735645;178735644 | chr2:179600373;179600372;179600371 |
N2AB | 4617 | 14074;14075;14076 | chr2:178735646;178735645;178735644 | chr2:179600373;179600372;179600371 |
N2A | 3690 | 11293;11294;11295 | chr2:178735646;178735645;178735644 | chr2:179600373;179600372;179600371 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | None | N | 0.321 | 0.396 | 0.434384183301 | gnomAD-4.0.0 | 2.05274E-06 | None | None | None | None | N | None | 2.98739E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79892E-06 | 0 | 0 |
Y/D | rs2081313340 | None | 0.317 | D | 0.593 | 0.448 | 0.651643192601 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/D | rs2081313340 | None | 0.317 | D | 0.593 | 0.448 | 0.651643192601 | gnomAD-4.0.0 | 6.57134E-06 | None | None | None | None | N | None | 2.41231E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/H | None | None | None | N | 0.287 | 0.23 | 0.273938319068 | gnomAD-4.0.0 | 1.59148E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85819E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.403 | ambiguous | 0.4594 | ambiguous | -2.99 | Highly Destabilizing | 0.067 | N | 0.438 | neutral | None | None | None | None | N |
Y/C | 0.082 | likely_benign | 0.0979 | benign | -1.929 | Destabilizing | None | N | 0.321 | neutral | N | 0.514303215 | None | None | N |
Y/D | 0.4212 | ambiguous | 0.49 | ambiguous | -2.69 | Highly Destabilizing | 0.317 | N | 0.593 | neutral | D | 0.558899366 | None | None | N |
Y/E | 0.6227 | likely_pathogenic | 0.6816 | pathogenic | -2.536 | Highly Destabilizing | 0.081 | N | 0.557 | neutral | None | None | None | None | N |
Y/F | 0.0998 | likely_benign | 0.1103 | benign | -1.243 | Destabilizing | 0.117 | N | 0.495 | neutral | N | 0.463611292 | None | None | N |
Y/G | 0.3716 | ambiguous | 0.4161 | ambiguous | -3.382 | Highly Destabilizing | 0.149 | N | 0.574 | neutral | None | None | None | None | N |
Y/H | 0.1402 | likely_benign | 0.1579 | benign | -1.908 | Destabilizing | None | N | 0.287 | neutral | N | 0.506421267 | None | None | N |
Y/I | 0.3124 | likely_benign | 0.3454 | ambiguous | -1.723 | Destabilizing | 0.081 | N | 0.502 | neutral | None | None | None | None | N |
Y/K | 0.5734 | likely_pathogenic | 0.6252 | pathogenic | -2.36 | Highly Destabilizing | 0.149 | N | 0.557 | neutral | None | None | None | None | N |
Y/L | 0.3493 | ambiguous | 0.3741 | ambiguous | -1.723 | Destabilizing | 0.001 | N | 0.206 | neutral | None | None | None | None | N |
Y/M | 0.4735 | ambiguous | 0.5256 | ambiguous | -1.425 | Destabilizing | 0.38 | N | 0.528 | neutral | None | None | None | None | N |
Y/N | 0.1776 | likely_benign | 0.2106 | benign | -2.949 | Highly Destabilizing | 0.188 | N | 0.57 | neutral | D | 0.600927703 | None | None | N |
Y/P | 0.8695 | likely_pathogenic | 0.8935 | pathogenic | -2.153 | Highly Destabilizing | 0.555 | D | 0.599 | neutral | None | None | None | None | N |
Y/Q | 0.3751 | ambiguous | 0.4285 | ambiguous | -2.747 | Highly Destabilizing | 0.38 | N | 0.546 | neutral | None | None | None | None | N |
Y/R | 0.3681 | ambiguous | 0.4056 | ambiguous | -2.014 | Highly Destabilizing | 0.38 | N | 0.562 | neutral | None | None | None | None | N |
Y/S | 0.1894 | likely_benign | 0.2186 | benign | -3.353 | Highly Destabilizing | 0.117 | N | 0.521 | neutral | D | 0.540731517 | None | None | N |
Y/T | 0.3119 | likely_benign | 0.3588 | ambiguous | -3.087 | Highly Destabilizing | 0.149 | N | 0.538 | neutral | None | None | None | None | N |
Y/V | 0.2575 | likely_benign | 0.285 | benign | -2.153 | Highly Destabilizing | 0.081 | N | 0.517 | neutral | None | None | None | None | N |
Y/W | 0.3792 | ambiguous | 0.4066 | ambiguous | -0.718 | Destabilizing | 0.935 | D | 0.513 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.