Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4935 | 15028;15029;15030 | chr2:178735643;178735642;178735641 | chr2:179600370;179600369;179600368 |
N2AB | 4618 | 14077;14078;14079 | chr2:178735643;178735642;178735641 | chr2:179600370;179600369;179600368 |
N2A | 3691 | 11296;11297;11298 | chr2:178735643;178735642;178735641 | chr2:179600370;179600369;179600368 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs759432239 | 0.093 | 0.124 | N | 0.391 | 0.28 | 0.282179105231 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.59E-05 | None | 0 | None | 0 | 0 | 1.66113E-04 |
K/E | rs759432239 | 0.093 | 0.124 | N | 0.391 | 0.28 | 0.282179105231 | gnomAD-4.0.0 | 4.77445E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77685E-05 | None | 1.88416E-05 | 0 | 0 | 0 | 3.02535E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2717 | likely_benign | 0.311 | benign | -0.545 | Destabilizing | 0.072 | N | 0.404 | neutral | None | None | None | None | N |
K/C | 0.5143 | ambiguous | 0.5404 | ambiguous | -0.679 | Destabilizing | 0.968 | D | 0.576 | neutral | None | None | None | None | N |
K/D | 0.4888 | ambiguous | 0.546 | ambiguous | -0.127 | Destabilizing | 0.567 | D | 0.407 | neutral | None | None | None | None | N |
K/E | 0.1535 | likely_benign | 0.1828 | benign | -0.015 | Destabilizing | 0.124 | N | 0.391 | neutral | N | 0.507787521 | None | None | N |
K/F | 0.5865 | likely_pathogenic | 0.6323 | pathogenic | -0.234 | Destabilizing | 0.567 | D | 0.559 | neutral | None | None | None | None | N |
K/G | 0.3451 | ambiguous | 0.3789 | ambiguous | -0.915 | Destabilizing | 0.272 | N | 0.453 | neutral | None | None | None | None | N |
K/H | 0.1893 | likely_benign | 0.2045 | benign | -1.263 | Destabilizing | 0.909 | D | 0.498 | neutral | None | None | None | None | N |
K/I | 0.2309 | likely_benign | 0.256 | benign | 0.409 | Stabilizing | 0.396 | N | 0.531 | neutral | None | None | None | None | N |
K/L | 0.2428 | likely_benign | 0.2729 | benign | 0.409 | Stabilizing | 0.06 | N | 0.429 | neutral | None | None | None | None | N |
K/M | 0.1861 | likely_benign | 0.2089 | benign | 0.24 | Stabilizing | 0.055 | N | 0.372 | neutral | N | 0.512039857 | None | None | N |
K/N | 0.3068 | likely_benign | 0.3456 | ambiguous | -0.519 | Destabilizing | 0.22 | N | 0.385 | neutral | N | 0.512949653 | None | None | N |
K/P | 0.7742 | likely_pathogenic | 0.8024 | pathogenic | 0.121 | Stabilizing | 0.726 | D | 0.469 | neutral | None | None | None | None | N |
K/Q | 0.1029 | likely_benign | 0.1118 | benign | -0.584 | Destabilizing | 0.497 | N | 0.421 | neutral | N | 0.479442906 | None | None | N |
K/R | 0.0639 | likely_benign | 0.0648 | benign | -0.678 | Destabilizing | 0.001 | N | 0.133 | neutral | N | 0.473387815 | None | None | N |
K/S | 0.2953 | likely_benign | 0.3357 | benign | -1.182 | Destabilizing | 0.014 | N | 0.198 | neutral | None | None | None | None | N |
K/T | 0.1423 | likely_benign | 0.1619 | benign | -0.86 | Destabilizing | 0.124 | N | 0.421 | neutral | N | 0.401365706 | None | None | N |
K/V | 0.2163 | likely_benign | 0.2449 | benign | 0.121 | Stabilizing | 0.157 | N | 0.429 | neutral | None | None | None | None | N |
K/W | 0.51 | ambiguous | 0.5177 | ambiguous | -0.107 | Destabilizing | 0.968 | D | 0.641 | neutral | None | None | None | None | N |
K/Y | 0.4305 | ambiguous | 0.4612 | ambiguous | 0.189 | Stabilizing | 0.726 | D | 0.542 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.