Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4942 | 15049;15050;15051 | chr2:178735622;178735621;178735620 | chr2:179600349;179600348;179600347 |
N2AB | 4625 | 14098;14099;14100 | chr2:178735622;178735621;178735620 | chr2:179600349;179600348;179600347 |
N2A | 3698 | 11317;11318;11319 | chr2:178735622;178735621;178735620 | chr2:179600349;179600348;179600347 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs773235984 | -1.308 | 0.549 | N | 0.525 | 0.307 | 0.603169182973 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/T | rs773235984 | -1.308 | 0.549 | N | 0.525 | 0.307 | 0.603169182973 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs773235984 | -1.308 | 0.549 | N | 0.525 | 0.307 | 0.603169182973 | gnomAD-4.0.0 | 3.84408E-06 | None | None | None | None | N | None | 3.38215E-05 | 0 | None | 0 | 2.42825E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1651 | likely_benign | 0.1874 | benign | -2.086 | Highly Destabilizing | 0.25 | N | 0.499 | neutral | None | None | None | None | N |
I/C | 0.5903 | likely_pathogenic | 0.6177 | pathogenic | -1.157 | Destabilizing | 0.977 | D | 0.562 | neutral | None | None | None | None | N |
I/D | 0.5365 | ambiguous | 0.5849 | pathogenic | -2.048 | Highly Destabilizing | 0.972 | D | 0.641 | neutral | None | None | None | None | N |
I/E | 0.3652 | ambiguous | 0.4001 | ambiguous | -1.993 | Destabilizing | 0.92 | D | 0.638 | neutral | None | None | None | None | N |
I/F | 0.1153 | likely_benign | 0.1242 | benign | -1.408 | Destabilizing | 0.85 | D | 0.492 | neutral | None | None | None | None | N |
I/G | 0.4782 | ambiguous | 0.5231 | ambiguous | -2.472 | Highly Destabilizing | 0.92 | D | 0.635 | neutral | None | None | None | None | N |
I/H | 0.311 | likely_benign | 0.3363 | benign | -1.825 | Destabilizing | 0.992 | D | 0.631 | neutral | None | None | None | None | N |
I/K | 0.1821 | likely_benign | 0.1969 | benign | -1.503 | Destabilizing | 0.896 | D | 0.638 | neutral | N | 0.50888965 | None | None | N |
I/L | 0.1155 | likely_benign | 0.1192 | benign | -1.051 | Destabilizing | 0.001 | N | 0.119 | neutral | N | 0.511894355 | None | None | N |
I/M | 0.078 | likely_benign | 0.0791 | benign | -0.748 | Destabilizing | 0.099 | N | 0.259 | neutral | D | 0.567317211 | None | None | N |
I/N | 0.1771 | likely_benign | 0.1943 | benign | -1.383 | Destabilizing | 0.972 | D | 0.641 | neutral | None | None | None | None | N |
I/P | 0.8326 | likely_pathogenic | 0.8732 | pathogenic | -1.37 | Destabilizing | 0.972 | D | 0.641 | neutral | None | None | None | None | N |
I/Q | 0.2777 | likely_benign | 0.3011 | benign | -1.52 | Destabilizing | 0.92 | D | 0.645 | neutral | None | None | None | None | N |
I/R | 0.1322 | likely_benign | 0.1413 | benign | -0.932 | Destabilizing | 0.896 | D | 0.639 | neutral | N | 0.502252575 | None | None | N |
I/S | 0.1808 | likely_benign | 0.2005 | benign | -1.971 | Destabilizing | 0.617 | D | 0.604 | neutral | None | None | None | None | N |
I/T | 0.0824 | likely_benign | 0.0896 | benign | -1.806 | Destabilizing | 0.549 | D | 0.525 | neutral | N | 0.490149982 | None | None | N |
I/V | 0.0732 | likely_benign | 0.0749 | benign | -1.37 | Destabilizing | 0.002 | N | 0.129 | neutral | N | 0.506025056 | None | None | N |
I/W | 0.5536 | ambiguous | 0.5757 | pathogenic | -1.628 | Destabilizing | 0.992 | D | 0.653 | neutral | None | None | None | None | N |
I/Y | 0.3288 | likely_benign | 0.3414 | ambiguous | -1.4 | Destabilizing | 0.92 | D | 0.585 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.