Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4944 | 15055;15056;15057 | chr2:178735616;178735615;178735614 | chr2:179600343;179600342;179600341 |
N2AB | 4627 | 14104;14105;14106 | chr2:178735616;178735615;178735614 | chr2:179600343;179600342;179600341 |
N2A | 3700 | 11323;11324;11325 | chr2:178735616;178735615;178735614 | chr2:179600343;179600342;179600341 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1479138931 | None | 0.001 | D | 0.297 | 0.123 | 0.202949470691 | gnomAD-4.0.0 | 1.02647E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.34926E-05 | 0 | 0 |
T/I | None | None | None | D | 0.342 | 0.16 | 0.250579442822 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0622 | likely_benign | 0.062 | benign | -0.87 | Destabilizing | 0.001 | N | 0.297 | neutral | D | 0.547977668 | None | None | N |
T/C | 0.164 | likely_benign | 0.1766 | benign | -0.628 | Destabilizing | None | N | 0.398 | neutral | None | None | None | None | N |
T/D | 0.2495 | likely_benign | 0.2824 | benign | -1.753 | Destabilizing | 0.009 | N | 0.587 | neutral | None | None | None | None | N |
T/E | 0.2081 | likely_benign | 0.2334 | benign | -1.555 | Destabilizing | 0.009 | N | 0.575 | neutral | None | None | None | None | N |
T/F | 0.0901 | likely_benign | 0.0964 | benign | -0.388 | Destabilizing | None | N | 0.468 | neutral | None | None | None | None | N |
T/G | 0.1339 | likely_benign | 0.1462 | benign | -1.294 | Destabilizing | 0.004 | N | 0.563 | neutral | None | None | None | None | N |
T/H | 0.1269 | likely_benign | 0.1346 | benign | -1.594 | Destabilizing | 0.245 | N | 0.624 | neutral | None | None | None | None | N |
T/I | 0.0841 | likely_benign | 0.0919 | benign | 0.244 | Stabilizing | None | N | 0.342 | neutral | D | 0.5537281 | None | None | N |
T/K | 0.1402 | likely_benign | 0.1477 | benign | -0.758 | Destabilizing | 0.007 | N | 0.574 | neutral | N | 0.509733856 | None | None | N |
T/L | 0.0671 | likely_benign | 0.0707 | benign | 0.244 | Stabilizing | 0.001 | N | 0.427 | neutral | None | None | None | None | N |
T/M | 0.0757 | likely_benign | 0.0788 | benign | 0.254 | Stabilizing | 0.138 | N | 0.649 | neutral | None | None | None | None | N |
T/N | 0.085 | likely_benign | 0.0906 | benign | -1.474 | Destabilizing | 0.009 | N | 0.489 | neutral | None | None | None | None | N |
T/P | 0.4341 | ambiguous | 0.4744 | ambiguous | -0.096 | Destabilizing | 0.033 | N | 0.634 | neutral | D | 0.736981276 | None | None | N |
T/Q | 0.1505 | likely_benign | 0.1608 | benign | -1.14 | Destabilizing | 0.044 | N | 0.639 | neutral | None | None | None | None | N |
T/R | 0.1011 | likely_benign | 0.1053 | benign | -1.075 | Destabilizing | 0.033 | N | 0.642 | neutral | N | 0.510527887 | None | None | N |
T/S | 0.0649 | likely_benign | 0.0668 | benign | -1.557 | Destabilizing | None | N | 0.148 | neutral | N | 0.511878888 | None | None | N |
T/V | 0.0813 | likely_benign | 0.0865 | benign | -0.096 | Destabilizing | None | N | 0.161 | neutral | None | None | None | None | N |
T/W | 0.2539 | likely_benign | 0.2792 | benign | -0.755 | Destabilizing | 0.497 | N | 0.629 | neutral | None | None | None | None | N |
T/Y | 0.1012 | likely_benign | 0.1064 | benign | -0.353 | Destabilizing | 0.022 | N | 0.639 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.