Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4947 | 15064;15065;15066 | chr2:178735607;178735606;178735605 | chr2:179600334;179600333;179600332 |
N2AB | 4630 | 14113;14114;14115 | chr2:178735607;178735606;178735605 | chr2:179600334;179600333;179600332 |
N2A | 3703 | 11332;11333;11334 | chr2:178735607;178735606;178735605 | chr2:179600334;179600333;179600332 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 1.0 | D | 0.823 | 0.833 | 0.860303665231 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9273 | likely_pathogenic | 0.9442 | pathogenic | -3.003 | Highly Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | N |
I/C | 0.9372 | likely_pathogenic | 0.9497 | pathogenic | -2.347 | Highly Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
I/D | 0.984 | likely_pathogenic | 0.9876 | pathogenic | -3.706 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
I/E | 0.9778 | likely_pathogenic | 0.9822 | pathogenic | -3.468 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
I/F | 0.2562 | likely_benign | 0.2702 | benign | -1.796 | Destabilizing | 1.0 | D | 0.817 | deleterious | D | 0.533297191 | None | None | N |
I/G | 0.9769 | likely_pathogenic | 0.9823 | pathogenic | -3.551 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
I/H | 0.9333 | likely_pathogenic | 0.9431 | pathogenic | -3.003 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
I/K | 0.9301 | likely_pathogenic | 0.9408 | pathogenic | -2.637 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
I/L | 0.1762 | likely_benign | 0.1894 | benign | -1.392 | Destabilizing | 0.993 | D | 0.423 | neutral | N | 0.485721347 | None | None | N |
I/M | 0.1583 | likely_benign | 0.1771 | benign | -1.34 | Destabilizing | 1.0 | D | 0.758 | deleterious | D | 0.537082221 | None | None | N |
I/N | 0.8046 | likely_pathogenic | 0.8273 | pathogenic | -3.045 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | D | 0.595839816 | None | None | N |
I/P | 0.9897 | likely_pathogenic | 0.9922 | pathogenic | -1.914 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
I/Q | 0.9469 | likely_pathogenic | 0.957 | pathogenic | -2.896 | Highly Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
I/R | 0.9241 | likely_pathogenic | 0.9371 | pathogenic | -2.222 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
I/S | 0.892 | likely_pathogenic | 0.9095 | pathogenic | -3.672 | Highly Destabilizing | 1.0 | D | 0.882 | deleterious | D | 0.686774341 | None | None | N |
I/T | 0.934 | likely_pathogenic | 0.9481 | pathogenic | -3.299 | Highly Destabilizing | 1.0 | D | 0.823 | deleterious | D | 0.608651657 | None | None | N |
I/V | 0.2143 | likely_benign | 0.2291 | benign | -1.914 | Destabilizing | 0.993 | D | 0.403 | neutral | N | 0.430576631 | None | None | N |
I/W | 0.9369 | likely_pathogenic | 0.9427 | pathogenic | -2.269 | Highly Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
I/Y | 0.7432 | likely_pathogenic | 0.7532 | pathogenic | -2.045 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.