Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4955 | 15088;15089;15090 | chr2:178735583;178735582;178735581 | chr2:179600310;179600309;179600308 |
N2AB | 4638 | 14137;14138;14139 | chr2:178735583;178735582;178735581 | chr2:179600310;179600309;179600308 |
N2A | 3711 | 11356;11357;11358 | chr2:178735583;178735582;178735581 | chr2:179600310;179600309;179600308 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | None | None | 0.565 | D | 0.605 | 0.459 | 0.579204274476 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0765 | likely_benign | 0.082 | benign | -0.781 | Destabilizing | 0.349 | N | 0.467 | neutral | N | 0.507287982 | None | None | N |
S/C | 0.1203 | likely_benign | 0.1271 | benign | -0.514 | Destabilizing | 0.024 | N | 0.445 | neutral | None | None | None | None | N |
S/D | 0.5019 | ambiguous | 0.5469 | ambiguous | -0.046 | Destabilizing | 0.775 | D | 0.471 | neutral | None | None | None | None | N |
S/E | 0.5566 | ambiguous | 0.6058 | pathogenic | -0.088 | Destabilizing | 0.775 | D | 0.476 | neutral | None | None | None | None | N |
S/F | 0.2607 | likely_benign | 0.3042 | benign | -1.184 | Destabilizing | 0.961 | D | 0.729 | prob.delet. | None | None | None | None | N |
S/G | 0.0822 | likely_benign | 0.0913 | benign | -0.966 | Destabilizing | 0.775 | D | 0.483 | neutral | None | None | None | None | N |
S/H | 0.4557 | ambiguous | 0.5165 | ambiguous | -1.479 | Destabilizing | 0.996 | D | 0.635 | neutral | None | None | None | None | N |
S/I | 0.202 | likely_benign | 0.2231 | benign | -0.401 | Destabilizing | 0.858 | D | 0.669 | neutral | None | None | None | None | N |
S/K | 0.6714 | likely_pathogenic | 0.7247 | pathogenic | -0.607 | Destabilizing | 0.775 | D | 0.475 | neutral | None | None | None | None | N |
S/L | 0.1037 | likely_benign | 0.109 | benign | -0.401 | Destabilizing | 0.565 | D | 0.605 | neutral | D | 0.595523523 | None | None | N |
S/M | 0.1888 | likely_benign | 0.2007 | benign | -0.013 | Destabilizing | 0.989 | D | 0.639 | neutral | None | None | None | None | N |
S/N | 0.1654 | likely_benign | 0.1799 | benign | -0.478 | Destabilizing | 0.775 | D | 0.489 | neutral | None | None | None | None | N |
S/P | 0.6742 | likely_pathogenic | 0.7343 | pathogenic | -0.497 | Destabilizing | 0.949 | D | 0.651 | neutral | D | 0.74036245 | None | None | N |
S/Q | 0.547 | ambiguous | 0.5991 | pathogenic | -0.721 | Destabilizing | 0.961 | D | 0.503 | neutral | None | None | None | None | N |
S/R | 0.5642 | likely_pathogenic | 0.6214 | pathogenic | -0.446 | Destabilizing | 0.923 | D | 0.652 | neutral | None | None | None | None | N |
S/T | 0.0721 | likely_benign | 0.0701 | benign | -0.587 | Destabilizing | 0.003 | N | 0.203 | neutral | N | 0.511905135 | None | None | N |
S/V | 0.2048 | likely_benign | 0.2254 | benign | -0.497 | Destabilizing | 0.633 | D | 0.63 | neutral | None | None | None | None | N |
S/W | 0.4347 | ambiguous | 0.4798 | ambiguous | -1.107 | Destabilizing | 0.996 | D | 0.75 | deleterious | None | None | None | None | N |
S/Y | 0.2507 | likely_benign | 0.2879 | benign | -0.855 | Destabilizing | 0.987 | D | 0.727 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.